Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Auxin and ABA act as central regulators of developmental networks associated with paradormancy in Canada thistle (Cirsium arvense)

(2012) James V. Anderson et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Dehydrin, alcohol dehydrogenase, and central metabolite levels are associated with cold tolerance in diploid strawberry (Fragaria spp.)

(2012) Jahn Davik et al.   PLANTA

Dehydration and vernalization treatments identify overlapping molecular networks impacting endodormancy maintenance in leafy spurge crown buds

(2011) Münevver Doğramacı et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Chilling of Dormant Buds HyperinducesFLOWERING LOCUS Tand Recruits GA-Inducible 1,3-β-Glucanases to Reopen Signal Conduits and Release Dormancy inPopulus

(2011) Päivi L.H. Rinne et al.   PLANT CELL

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

(2010) Saneyoshi Ueno et al.   BMC GENOMICS

Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes

(2010) David Cohen et al.   BMC GENOMICS

Identification of genes associated with growth cessation and bud dormancy entrance using a dormancy-incapable tree mutant

(2010) Sergio Jiménez et al.   BMC PLANT BIOLOGY

Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.)

(2010) Peter E Hedley et al.   BMC PLANT BIOLOGY

Low temperatures impact dormancy status, flowering competence, and transcript profiles in crown buds of leafy spurge

(2010) Münevver Doğramacı et al.   PLANT MOLECULAR BIOLOGY

Characterization, expression and function of DORMANCY ASSOCIATED MADS-BOX genes from leafy spurge

(2010) David P. Horvath et al.   PLANT MOLECULAR BIOLOGY

Circadian Clock Components Regulate Entry and Affect Exit of Seasonal Dormancy as Well as Winter Hardiness in Populus Trees

(2010) C. Ibanez et al.   PLANT PHYSIOLOGY

Identification of genes associated with bud dormancy release in Prunus persica by suppression subtractive hybridization

(2010) C. Leida et al.   TREE PHYSIOLOGY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Contrasting relationships between the diversity of candidate genes and variation of bud burst in natural and segregating populations of European oaks

(2009) J Derory et al.   HEREDITY

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

Transcriptome analysis identifies novel responses and potential regulatory genes involved in seasonal dormancy transitions of leafy spurge (Euphorbia esula L.)

(2008) David P Horvath et al.   BMC GENOMICS

LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana

(2008) Michaela Hundertmark et al.   BMC GENOMICS

Transcript profiling in Vitis riparia during chilling requirement fulfillment reveals coordination of gene expression patterns with optimized bud break

(2008) Kathy Mathiason et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Dormancy in potato tuber meristems: chemically induced cessation in dormancy matches the natural process based on transcript profiles

(2008) Michael Campbell et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue

(2008) Jorge A.P. Paiva et al.   NEW PHYTOLOGIST

Dehydrins expression related to timing of bud burst in Norway spruce

(2008) Igor A. Yakovlev et al.   PLANTA

Similar mechanisms might be triggered by alternative external stimuli that induce dormancy release in grape buds

(2008) Tamar Halaly et al.   PLANTA