Codon usage patterns in Chinese bayberry (Myrica rubra) based on RNA-Seq data

Evaluation of Codon Biology in Citrus and Poncirus trifoliata Based on Genomic Features and Frame Corrected Expressed Sequence Tags

(2013) T. Ahmad et al.   DNA RESEARCH

Analysis of Expressed Sequence Tags from Chinese Bayberry Fruit (Myrica rubra Sieb. and Zucc.) at Different Ripening Stages and Their Association with Fruit Quality Development

(2013) Changqing Zhu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening

(2013) Silin Zhong et al.   NATURE BIOTECHNOLOGY

Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity

(2013) S. A. Shabalina et al.   NUCLEIC ACIDS RESEARCH

Development and characterization of 109 polymorphic EST-SSRs derived from the Chinese bayberry (Myrica rubra , Myricaceae) transcriptome

(2012) Shao-Yang Zhang et al.   AMERICAN JOURNAL OF BOTANY

Development of simple sequence repeat (SSR) markers from a genome survey of Chinese bayberry (Myrica rubra)

(2012) Yun Jiao et al.   BMC GENOMICS

Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq

(2012) Chao Feng et al.   BMC GENOMICS

A Role for tRNA Modifications in Genome Structure and Codon Usage

(2012) Eva Maria Novoa et al.   CELL

UU/UA Dinucleotide Frequency Reduction in Coding Regions Results in Increased mRNA Stability and Protein Expression

(2012) Maher Al-Saif et al.   MOLECULAR THERAPY

Synonymous Codon Ordering: A Subtle but Prevalent Strategy of Bacteria to Improve Translational Efficiency

(2012) Zhu-Qing Shao et al.   PLoS One

Mutational Bias and Translational Selection Shaping the Codon Usage Pattern of Tissue-Specific Genes in Rice

(2012) Qingpo Liu   PLoS One

Balanced Codon Usage Optimizes Eukaryotic Translational Efficiency

(2012) Wenfeng Qian et al.   PLoS Genetics

Reduced Efficacy of Natural Selection on Codon Usage Bias in Selfing Arabidopsis and Capsella Species

(2011) Suo Qiu et al.   Genome Biology and Evolution

Cyanidin-3-Glucoside-Rich Extract from Chinese Bayberry Fruit Protects Pancreatic β Cells and Ameliorates Hyperglycemia in Streptozotocin-Induced Diabetic Mice

(2011) Chong-De Sun et al.   JOURNAL OF MEDICINAL FOOD

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Chromosomal G + C Content Evolution in Yeasts: Systematic Interspecies Differences, and GC-Poor Troughs at Centromeres

(2010) Denise B. Lynch et al.   Genome Biology and Evolution

Anthocyanins from Chinese Bayberry Extract Protect β Cells from Oxidative Stress-Mediated Injury via HO-1 Upregulation

(2010) Bo Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Synonymous but not the same: the causes and consequences of codon bias

(2010) Joshua B. Plotkin et al.   NATURE REVIEWS GENETICS

High-level accumulation of recombinant miraculin protein in transgenic tomatoes expressing a synthetic miraculin gene with optimized codon usage terminated by the native miraculin terminator

(2010) Kyoko Hiwasa-Tanase et al.   PLANT CELL REPORTS

Coordinated regulation of anthocyanin biosynthesis in Chinese bayberry (Myrica rubra) fruit by a R2R3 MYB transcription factor

(2010) Shan-Shan Niu et al.   PLANTA

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

Molecular evolution of synonymous codon usage in Populus

(2009) Pär K Ingvarsson   BMC EVOLUTIONARY BIOLOGY

Natural Selection on Synonymous and Nonsynonymous Mutations Shapes Patterns of Polymorphism in Populus tremula

(2009) P. K. Ingvarsson   MOLECULAR BIOLOGY AND EVOLUTION

Selection on Codon Bias

(2008) Ruth Hershberg et al.   Annual Review of Genetics

Preferred and avoided codon pairs in three domains of life

(2008) Age Tats et al.   BMC GENOMICS

Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening

(2008) Ross N Crowhurst et al.   BMC GENOMICS

Differential Selective Constraints Shaping Codon Usage Pattern of Housekeeping and Tissue-specific Homologous Genes of Rice and Arabidopsis

(2008) P. Mukhopadhyay et al.   DNA RESEARCH