Evaluating our ability to predict the structural disruption of RNA by SNPs

HiTRACE: high-throughput robust analysis for capillary electrophoresis

(2011) Sungroh Yoon et al.   BIOINFORMATICS

R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

(2011) Zasha Weinberg et al.   BMC BIOINFORMATICS

Pharmacogenomics of the RNA World: Structural RNA Polymorphisms in Drug Therapy

(2011) W Sadee et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

RNA molecules with conserved catalytic cores but variable peripheries fold along unique energetically optimized pathways

(2011) S. Mitra et al.   RNA

Sharing and archiving nucleic acid structure mapping data

(2011) P. Rocca-Serra et al.   RNA

Comparative Study between Transcriptionally- and Translationally-Acting Adenine Riboswitches Reveals Key Differences in Riboswitch Regulatory Mechanisms

(2011) Jean-François Lemay et al.   PLoS Genetics

Mutational analysis in RNAs: comparing programs for RNA deleterious mutation prediction

(2010) D. Barash et al.   BRIEFINGS IN BIOINFORMATICS

Genome-wide measurement of RNA secondary structure in yeast

(2010) Michael Kertesz et al.   NATURE

Atomic accuracy in predicting and designing noncanonical RNA structure

(2010) Rhiju Das et al.   NATURE METHODS

Crossing the borders: Poly(A)-binding proteins working on both sides of the fence

(2010) Jean-François Lemay et al.   RNA Biology

Evaluation of the information content of RNA structure mapping data for secondary structure prediction

(2010) S. Quarrier et al.   RNA

Disease-Associated Mutations That Alter the RNA Structural Ensemble

(2010) Matthew Halvorsen et al.   PLoS Genetics

Shifting Paradigm of Association Studies: Value of Rare Single-Nucleotide Polymorphisms

(2008) Ivan P. Gorlov et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Alpha-1 Antitrypsin Deficiency: Pathogenesis, Clinical Presentation, Diagnosis, and Treatment

(2008) Thomas Köhnlein et al.   AMERICAN JOURNAL OF MEDICINE

ROC analysis: applications to the classification of biological sequences and 3D structures

(2008) P. Sonego et al.   BRIEFINGS IN BIOINFORMATICS

Unwinding RNA's secrets: advances in the biology, physics, and modeling of complex RNAs

(2008) Vincent B Chu et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The impact of target site accessibility on the design of effective siRNAs

(2008) Hakim Tafer et al.   NATURE BIOTECHNOLOGY

Crystal structures of the SAM-III/SMK riboswitch reveal the SAM-dependent translation inhibition mechanism

(2008) Changrui Lu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structure of the SAM-II riboswitch bound to S-adenosylmethionine

(2008) Sunny D Gilbert et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural inference of native and partially folded RNA by high-throughput contact mapping

(2008) R. Das et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lack of secondary structure characterizes the 5' ends of mammalian mitochondrial mRNAs

(2008) C. N. Jones et al.   RNA

High-Throughput SHAPE Analysis Reveals Structures in HIV-1 Genomic RNA Strongly Conserved across Distinct Biological States

(2008) Kevin A Wilkinson et al.   PLOS BIOLOGY

Transcriptome content and dynamics at single-nucleotide resolution

(2008) Nicole Cloonan et al.   GENOME BIOLOGY