Gene coexpression clusters and putative regulatory elements underlying seed storage reserve accumulation in Arabidopsis

A survey of quantitative real-time polymerase chain reaction internal reference genes for expression studies in Brassica napus

(2010) Xue Chen et al.   ANALYTICAL BIOCHEMISTRY

Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research

(2010) Helen North et al.   PLANT JOURNAL

Relationship between gene co-expression and sharing of transcription factor binding sites in Drosophila melanogaster

(2009) A. Marco et al.   BIOINFORMATICS

Co-expression networks: graph properties and topological comparisons

(2009) Ramon Xulvi-Brunet et al.   BIOINFORMATICS

Increasing the flow of carbon into seed oil

(2009) Randall J. Weselake et al.   BIOTECHNOLOGY ADVANCES

Coexpression network based on natural variation in human gene expression reveals gene interactions and functions

(2009) R. R. Nayak et al.   GENOME RESEARCH

A Pivotal Role of the Basic Leucine Zipper Transcription Factor bZIP53 in the Regulation of Arabidopsis Seed Maturation Gene Expression Based on Heterodimerization and Protein Complex Formation

(2009) R. Alonso et al.   PLANT CELL

Repression of Seed Maturation Genes by a Trihelix Transcriptional Repressor in Arabidopsis Seedlings

(2009) M.-J. Gao et al.   PLANT CELL

Arabidopsis NF-YB subunits LEC1 and LEC1-LIKE activate transcription by interacting with seed-specific ABRE-binding factors

(2009) Akiko Yamamoto et al.   PLANT JOURNAL

An AP2-type transcription factor, WRINKLED1, ofArabidopsis thalianabinds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis

(2009) Kenichiro Maeo et al.   PLANT JOURNAL

Assembly of an Interactive Correlation Network for the Arabidopsis Genome Using a Novel Heuristic Clustering Algorithm

(2009) M. Mutwil et al.   PLANT PHYSIOLOGY

HORMONOMETER: A Tool for Discerning Transcript Signatures of Hormone Action in the Arabidopsis Transcriptome

(2009) D. Volodarsky et al.   PLANT PHYSIOLOGY

Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development

(2009) R. Angelovici et al.   PLANT PHYSIOLOGY

Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks

(2009) K. Vandepoele et al.   PLANT PHYSIOLOGY

Network Analysis in the Social Sciences

(2009) S. P. Borgatti et al.   SCIENCE

fdrMotif: identifying cis-elements by an EM algorithm coupled with false discovery rate control

(2008) Leping Li et al.   BIOINFORMATICS

Metabolic control analysis is helpful for informed genetic manipulation of oilseed rape (Brassica napus) to increase seed oil content

(2008) Randall J. Weselake et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis

(2008) Bruno Müller et al.   NATURE

RSAT: regulatory sequence analysis tools

(2008) M. Thomas-Chollier et al.   NUCLEIC ACIDS RESEARCH

Transcriptional Regulation of Storage Protein Synthesis During Dicotyledon Seed Filling

(2008) J. Verdier et al.   PLANT AND CELL PHYSIOLOGY

Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis

(2008) Monica Santos-Mendoza et al.   PLANT JOURNAL

Genome-wide targeted prediction of ABA responsive genes in rice based on over-represented cis-motif in co-expressed genes

(2008) Sangram K. Lenka et al.   PLANT MOLECULAR BIOLOGY

CressExpress: A Tool For Large-Scale Mining of Expression Data from Arabidopsis

(2008) V. Srinivasasainagendra et al.   PLANT PHYSIOLOGY

LEAFY COTYLEDON1 Is a Key Regulator of Fatty Acid Biosynthesis in Arabidopsis

(2008) J. Mu et al.   PLANT PHYSIOLOGY

Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis

(2008) Sébastien Baud et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

LECs go crazy in embryo development

(2008) S BRAYBROOK et al.   TRENDS IN PLANT SCIENCE