Paternal X inactivation does not correlate with X chromosome evolutionary strata in marsupials

Origins and functional evolution of Y chromosomes across mammals

(2014) Diego Cortez et al.   NATURE

Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica

(2013) X. Wang et al.   GENOME RESEARCH

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Random X inactivation in the mule and horse placenta

(2012) X. Wang et al.   GENOME RESEARCH

Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation

(2012) Jennifer Grant et al.   NATURE

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome

(2012) E. Pessia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution

(2011) V. J. Murtagh et al.   GENOME RESEARCH

Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development

(2011) Ikuhiro Okamoto et al.   NATURE

Evolution from XIST-Independent to XIST-Controlled X-Chromosome Inactivation: Epigenetic Modifications in Distantly Related Mammals

(2011) Julie Chaumeil et al.   PLoS One

Activity map of the tammar X chromosome shows that marsupial X inactivation is incomplete and escape is stochastic

(2011) Shafagh Al Nadaf et al.   GENOME BIOLOGY

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

(2011) Marilyn B Renfree et al.   GENOME BIOLOGY

Global survey of escape from X inactivation by RNA-sequencing in mouse

(2010) F. Yang et al.   GENOME RESEARCH

Random X Inactivation and Extensive Mosaicism in Human Placenta Revealed by Analysis of Allele-Specific Gene Expression along the X Chromosome

(2010) Joana Carvalho Moreira de Mello et al.   PLoS One

Epigenetic modifications on X chromosomes in marsupial and monotreme mammals and implications for evolution of dosage compensation

(2010) Willem Rens et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

(2009) Daniel C. Koboldt et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Key Features of the X Inactivation Process Are Conserved between Marsupials and Eutherians

(2009) Shantha K. Mahadevaiah et al.   CURRENT BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

X Chromosome Dosage Compensation: How Mammals Keep the Balance

(2008) Bernhard Payer et al.   Annual Review of Genetics

Physical map of two tammar wallaby chromosomes: A strategy for mapping in non-model mammals

(2008) Janine E. Deakin et al.   CHROMOSOME RESEARCH

X chromosome inactivation patterns in normal and X-linked hereditary nephropathy carrier dogs

(2008) R.J. Bell et al.   CYTOGENETIC AND GENOME RESEARCH

Large-Scale Population Study of Human Cell Lines Indicates that Dosage Compensation Is Virtually Complete

(2008) Colette M. Johnston et al.   PLoS Genetics