Genotypic but not phenotypic historical contingency revealed by viral experimental evolution

Epistasis between mutations is host-dependent for an RNA virus

(2012) J. Lalic et al.   Biology Letters

Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus

(2012) J Lalić et al.   HEREDITY

Genomic analysis of a key innovation in an experimental Escherichia coli population

(2012) Zachary D. Blount et al.   NATURE

Founder Effects Persist Despite Adaptive Differentiation: A Field Experiment with Lizards

(2012) J. J. Kolbe et al.   SCIENCE

Historical Contingencies Modulate the Adaptability of Rice Yellow Mottle Virus

(2012) Nils Poulicard et al.   PLoS Pathogens

SPATIAL ENVIRONMENTAL VARIATION CAN SELECT FOR EVOLVABILITY

(2011) Michael E. Palmer et al.   EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Effect of Host Species on the Distribution of Mutational Fitness Effects for an RNA Virus

(2011) Jasna Lalić et al.   PLoS Genetics

The Rate and Spectrum of Spontaneous Mutations in a Plant RNA Virus

(2010) N. Tromas et al.   GENETICS

Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes

(2010) Frank J. Poelwijk et al.   JOURNAL OF THEORETICAL BIOLOGY

Evolution in Regulatory Regions Rapidly Compensates the Cost of Nonoptimal Codon Usage

(2010) D. Amoros-Moya et al.   MOLECULAR BIOLOGY AND EVOLUTION

Escherichia coli rpoB Mutants Have Increased Evolvability in Proportion to Their Fitness Defects

(2010) J. E. Barrick et al.   MOLECULAR BIOLOGY AND EVOLUTION

Stability of Tobacco etch virus infectious clones in plasmid vectors

(2010) Leonor C. Bedoya et al.   VIRUS RESEARCH

Parallelism and historical contingency during rapid ecotype divergence in an isopod

(2009) F. EROUKHMANOFF et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The Genetics of Adaptation for Eight Microvirid Bacteriophages

(2009) Darin R. Rokyta et al.   JOURNAL OF MOLECULAR EVOLUTION

Experimental evolution reveals natural selection on standing genetic variation

(2009) Henrique Teotónio et al.   NATURE GENETICS

Mutational neighbourhood and mutation supply rate constrain adaptation in Pseudomonas aeruginosa

(2009) A. R. Hall et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The evolution of virulence and pathogenicity in plant pathogen populations

(2008) SOLEDAD SACRISTÁN et al.   MOLECULAR PLANT PATHOLOGY

An overlapping essential gene in the Potyviridae

(2008) B. Y.-W. Chung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli

(2008) Z. D. Blount et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Persistence of foot-and-mouth disease virus in cell culture revisited: implications for contingency in evolution

(2007) M. Herrera et al.   JOURNAL OF GENERAL VIROLOGY