Short term optical defocus perturbs normal developmental shifts in retina/RPE protein abundance

Integrated SWATH-based and targeted-based proteomics provide insights into the retinal emmetropization process in guinea pig

(2018) Sze Wan Shan et al.   Journal of Proteomics

Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error

(2018) Milly S. Tedja et al.   NATURE GENETICS

Pathway analysis identifies altered mitochondrial metabolism, neurotransmission, structural pathways and complement cascade in retina/RPE/ choroid in chick model of form-deprivation myopia

(2018) Loretta Giummarra et al.   PeerJ

The Structure and Function of the Na,K-ATPase Isoforms in Health and Disease

(2017) Michael V. Clausen et al.   Frontiers in Physiology

Changes in retinal metabolic profiles associated with form deprivation myopia development in guinea pigs

(2017) Jinglei Yang et al.   Scientific Reports

Novel evidence for complement system activation in chick myopia and hyperopia models: a meta-analysis of transcriptome datasets

(2017) Nina Riddell et al.   Scientific Reports

Regulation of neurogenesis by calcium signaling

(2016) Anna B. Toth et al.   CELL CALCIUM

Metabolic reprogramming during neuronal differentiation

(2016) M Agostini et al.   CELL DEATH AND DIFFERENTIATION

Global Prevalence of Myopia and High Myopia and Temporal Trends from 2000 through 2050

(2016) Brien A. Holden et al.   OPHTHALMOLOGY

Bidirectional Expression of Metabolic, Structural, and Immune Pathways in Early Myopia and Hyperopia

(2016) Nina Riddell et al.   Frontiers in Neuroscience

Large-Scale microRNA Expression Profiling Identifies Putative Retinal miRNA-mRNA Signaling Pathways Underlying Form-Deprivation Myopia in Mice

(2016) Andrei V. Tkatchenko et al.   PLoS One

BubbleGUM: automatic extraction of phenotype molecular signatures and comprehensive visualization of multiple Gene Set Enrichment Analyses

(2015) Lionel Spinelli et al.   BMC GENOMICS

ON pathway mutations increase susceptibility to form-deprivation myopia

(2015) Ranjay Chakraborty et al.   EXPERIMENTAL EYE RESEARCH

Astrocyte sodium signaling and the regulation of neurotransmission

(2015) Sergei Kirischuk et al.   GLIA

Effects of electroacupuncture on the levels of retinal gamma-aminobutyric acid and its receptors in a guinea pig model of lens-induced myopia

(2015) F. Sha et al.   NEUROSCIENCE

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Differential Retinal Protein Expressions During form Deprivation Myopia in Albino Guinea Pigs

(2014) Yi Wu et al.   Current Proteomics

Rab proteins: The key regulators of intracellular vesicle transport

(2014) Tanmay Bhuin et al.   EXPERIMENTAL CELL RESEARCH

Gene expression signatures in tree shrew choroid during lens-induced myopia and recovery

(2014) Li He et al.   EXPERIMENTAL EYE RESEARCH

Involvement of GABA Transporters in Atropine-Treated Myopic Retina As Revealed by iTRAQ Quantitative Proteomics

(2014) Veluchamy A. Barathi et al.   JOURNAL OF PROTEOME RESEARCH

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic

(2014) Erik L.L. Sonnhammer et al.   NUCLEIC ACIDS RESEARCH

Sorcin Links Calcium Signaling to Vesicle Trafficking, Regulates Polo-Like Kinase 1 and Is Necessary for Mitosis

(2014) Vasiliki S. Lalioti et al.   PLoS One

Epidemiology and Disease Burden of Pathologic Myopia and Myopic Choroidal Neovascularization: An Evidence-Based Systematic Review

(2013) Tien Y. Wong et al.   AMERICAN JOURNAL OF OPHTHALMOLOGY

The nucleolus—guardian of cellular homeostasis and genome integrity

(2013) Ingrid Grummt   CHROMOSOMA

The effects and interactions of GABAergic and dopaminergic agents in the prevention of form deprivation myopia by brief periods of normal vision

(2013) Katrina L. Schmid et al.   EXPERIMENTAL EYE RESEARCH

The m Subunit of Murine Translation Initiation Factor eIF3 Maintains the Integrity of the eIF3 Complex and Is Required for Embryonic Development, Homeostasis, and Organ Size Control

(2013) Liyong Zeng et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Widespread Regulation of Translation by Elongation Pausing in Heat Shock

(2013) Reut Shalgi et al.   MOLECULAR CELL

Organ Size Control by Hippo and TOR Pathways

(2012) Karen Tumaneng et al.   CURRENT BIOLOGY

Flicker downregulates the content of crystallin proteins in form-deprived C57BL/6 mouse retina

(2012) Saiqun Li et al.   EXPERIMENTAL EYE RESEARCH

Topological analysis and interactive visualization of biological networks and protein structures

(2012) Nadezhda T Doncheva et al.   Nature Protocols

Nuclear pore complex composition: a new regulator of tissue-specific and developmental functions

(2012) Marcela Raices et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Mechanisms of CaMKII action in long-term potentiation

(2012) John Lisman et al.   NATURE REVIEWS NEUROSCIENCE

Subfoveal Choroidal Thickness: The Beijing Eye Study

(2012) Wen Bin Wei et al.   OPHTHALMOLOGY

Lack of the Sodium-Driven Chloride Bicarbonate Exchanger NCBE Impairs Visual Function in the Mouse Retina

(2012) Gerrit Hilgen et al.   PLoS One

The complex interactions of retinal, optical and environmental factors in myopia aetiology

(2012) D.I. Flitcroft   PROGRESS IN RETINAL AND EYE RESEARCH

Synchronizing Nuclear Import of Ribosomal Proteins with Ribosome Assembly

(2012) D. Kressler et al.   SCIENCE

Heat shock factors: integrators of cell stress, development and lifespan

(2010) Malin Åkerfelt et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Reactome: a database of reactions, pathways and biological processes

(2010) D. Croft et al.   NUCLEIC ACIDS RESEARCH

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

(2010) Daniele Merico et al.   PLoS One

Increased A-to-I RNA editing of the transcript for GABAA receptor subunit α3 during chick retinal development

(2010) HENRIK RING et al.   VISUAL NEUROSCIENCE

A Protein Inventory of Human Ribosome Biogenesis Reveals an Essential Function of Exportin 5 in 60S Subunit Export

(2010) Thomas Wild et al.   PLOS BIOLOGY

Identification of Myopia-Related Marker Proteins in Tilapia Retinal, RPE, and Choroidal Tissue following Induced Form Deprivation

(2009) Rasmus Jostrup et al.   CURRENT EYE RESEARCH

The role of nuclear pores in gene regulation, development and disease

(2009) Maya Capelson et al.   EMBO REPORTS

Glutamate Transporter Coupling to Na,K-ATPase

(2009) E. M. Rose et al.   JOURNAL OF NEUROSCIENCE

The Self-Tuning Neuron: Synaptic Scaling of Excitatory Synapses

(2008) Gina G. Turrigiano   CELL

Novel, Potent, and Selective GABAC Antagonists Inhibit Myopia Development and Facilitate Learning and Memory

(2008) M. Chebib et al.   JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Integrated network analysis platform for protein-protein interactions

(2008) Jianmin Wu et al.   NATURE METHODS

Protein expression profiling during chick retinal maturation: a proteomics-based approach

(2008) Sorcha Finnegan et al.   Proteome Science