Normalization strategies for microRNA profiling experiments: a ‘normal’ way to a hidden layer of complexity?

Embryonic Stem Cell MicroRNAs: Defining Factors in Induced Pluripotent (iPS) and Cancer (CSC) Stem Cells?

(2011) Preethi Gunaratne   Current Stem Cell Research & Therapy

Regulation of mRNA Translation and Stability by microRNAs

(2010) Marc Robert Fabian et al.   Annual Review of Biochemistry

Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs

(2010) Sylvain Pradervand et al.   BIOTECHNIQUES

MicroRNA expression profiling to identify and validate reference genes for relative quantification in colorectal cancer

(2010) Kah Hoong Chang et al.   BMC CANCER

Myc-Induced MicroRNAs Integrate Myc-Mediated Cell Proliferation and Cell Fate

(2010) Jong Wook Kim et al.   CANCER RESEARCH

Expression profiling of microRNA using real-time quantitative PCR, how to use it and what is available

(2010) Vladimir Benes et al.   METHODS

mRNA and microRNA quality control for RT-qPCR analysis

(2010) C. Becker et al.   METHODS

MicroRNAs as biomarkers

(2010)   NATURE

Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate

(2010) Annelie Carlsbecker et al.   NATURE

Pharmacological potential of RNAi — Focus on miRNA

(2010) Alexander Pfeifer et al.   PHARMACOLOGY & THERAPEUTICS

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

(2010) A. Git et al.   RNA

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

MicroRNA detection by microarray

(2009) Wei Li et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

MicroRNA-Based Therapeutics for Cancer

(2009) Vivien Wang et al.   BIODRUGS

A modified LOESS normalization applied to microRNA arrays: a comparative evaluation

(2009) Davide Risso et al.   BIOINFORMATICS

A personalized microRNA microarray normalization method using a logistic regression model

(2009) B. Wang et al.   BIOINFORMATICS

A comparison on effects of normalisations in the detection of differentially expressed genes

(2009) Monica Chiogna et al.   BMC BIOINFORMATICS

Reciprocal regulation of microRNA and mRNA profiles in neuronal development and synapse formation

(2009) Sergei A Manakov et al.   BMC GENOMICS

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Why the need for qPCR publication guidelines?—The case for MIQE

(2009) Stephen A. Bustin   METHODS

Direct RNA sequencing

(2009) Fatih Ozsolak et al.   NATURE

Limitations and possibilities of small RNA digital gene expression profiling

(2009) Sam E V Linsen et al.   NATURE METHODS

MicroRNAs: key regulators of stem cells

(2009) Vamsi K. Gangaraju et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Loqs and R2D2 act sequentially in the siRNA pathway in Drosophila

(2009) João Trindade Marques et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Identification of microRNAs with regulatory potential using a matched microRNA-mRNA time-course data

(2009) V. Jayaswal et al.   NUCLEIC ACIDS RESEARCH

Intra-Platform Repeatability and Inter-Platform Comparability of MicroRNA Microarray Technology

(2009) Fumiaki Sato et al.   PLoS One

Microrna-221 and Microrna-222 Modulate Differentiation and Maturation of Skeletal Muscle Cells

(2009) Beatrice Cardinali et al.   PLoS One

A PCR-based platform for microRNA expression profiling studies

(2009) X. Wang   RNA

Impact of normalization on miRNA microarray expression profiling

(2009) S. Pradervand et al.   RNA

Quantitative miRNA expression analysis: Comparing microarrays with next-generation sequencing

(2009) H. Willenbrock et al.   RNA

Consensus miRNA expression profiles derived from interplatform normalization of microarray data

(2009) R. Bargaje et al.   RNA

Absolute quantification of microRNAs by using a universal reference

(2009) U. Bissels et al.   RNA

A Genome-Wide Characterization of MicroRNA Genes in Maize

(2009) Lifang Zhang et al.   PLoS Genetics

A novel and universal method for microRNA RT-qPCR data normalization

(2009) Pieter Mestdagh et al.   GENOME BIOLOGY

Using Generalized Procrustes Analysis (GPA) for normalization of cDNA microarray data

(2008) Huiling Xiong et al.   BMC BIOINFORMATICS

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Comparison of normalization methods with microRNA microarray

(2008) You-Jia Hua et al.   GENOMICS

Strategies for profiling MicroRNA expression

(2008) William Kong et al.   JOURNAL OF CELLULAR PHYSIOLOGY

miChip: an array-based method for microRNA expression profiling using locked nucleic acid capture probes

(2008) Mirco Castoldi et al.   Nature Protocols

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Quality Assessment and Data Analysis for microRNA Expression Arrays

(2008) D. Sarkar et al.   NUCLEIC ACIDS RESEARCH

Integrative MicroRNA and Proteomic Approaches Identify Novel Osteoarthritis Genes and Their Collaborative Metabolic and Inflammatory Networks

(2008) Dimitrios Iliopoulos et al.   PLoS One

Normalization of microRNA expression levels in quantitative RT-PCR assays: Identification of suitable reference RNA targets in normal and cancerous human solid tissues

(2008) H. J. Peltier et al.   RNA

Profiling microRNA expression with microarrays

(2008) James Q. Yin et al.   TRENDS IN BIOTECHNOLOGY