Metatranscriptomic analysis of lignocellulolytic microbial communities involved in high-solids decomposition of rice straw

Diversity and dynamics of the microbial community on decomposing wheat straw during mushroom compost production

(2014) Xi Zhang et al.   BIORESOURCE TECHNOLOGY

Comparative metatranscriptomic signatures of wood and paper feeding in the gut of the termiteReticulitermes flavipes(Isoptera: Rhinotermitidae)

(2013) R. Raychoudhury et al.   INSECT MOLECULAR BIOLOGY

Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites

(2013) Shaomei He et al.   PLoS One

Discovery of Microorganisms and Enzymes Involved in High-Solids Decomposition of Rice Straw Using Metagenomic Analyses

(2013) Amitha P. Reddy et al.   PLoS One

Aerobic deconstruction of cellulosic biomass by an insect-associated Streptomyces

(2013) Taichi E. Takasuka et al.   Scientific Reports

Metatranscriptomics Reveals the Diversity of Genes Expressed by Eukaryotes in Forest Soils

(2012) Coralie Damon et al.   PLoS One

Microbial metatranscriptomics in a permanent marine oxygen minimum zone

(2011) Frank J. Stewart et al.   ENVIRONMENTAL MICROBIOLOGY

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Cleavage of cellulose by a CBM33 protein

(2011) Zarah Forsberg et al.   PROTEIN SCIENCE

Interplay between Clostridium thermocellum Family 48 and Family 9 Cellulases in Cellulosomal versus Noncellulosomal States

(2010) Y. Vazana et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of Bacteria and Glycosyl Hydrolase Family 48 Genes in Cellulolytic Consortia Enriched from Thermophilic Biocompost

(2010) J. A. Izquierdo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evaluation of High Solids Alkaline Pretreatment of Rice Straw

(2010) Yu-Shen Cheng et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Isolation and screening of potential actinobacteria for rapid composting of rice straw

(2010) H. Kausar et al.   BIODEGRADATION

Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities

(2010) Kristen M. DeAngelis et al.   BioEnergy Research

Changes in the actinomycetal communities during continuous thermophilic composting as revealed by denaturing gradient gel electrophoresis and quantitative PCR

(2010) Yong Xiao et al.   BIORESOURCE TECHNOLOGY

Rfam: Wikipedia, clans and the "decimal" release

(2010) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Methods for Pretreatment of Lignocellulosic Biomass for Efficient Hydrolysis and Biofuel Production

(2009) Parveen Kumar et al.   INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH

The minimal enzyme cocktail concept for biomass processing

(2009) Anne S. Meyer et al.   JOURNAL OF CEREAL SCIENCE

The water footprint of bioenergy

(2009) W. Gerbens-Leenes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation and characterization ofThermobifida fusca carbohydrate-binding module proteins E7 and E8

(2008) Felix Moser et al.   BIOTECHNOLOGY AND BIOENGINEERING

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Next-generation biomass feedstocks for biofuel production

(2008) Blake A Simmons et al.   GENOME BIOLOGY