Incorporation of memory effects in coarse-grained modeling via the Mori-Zwanzig formalism

Mesoscale modeling of phase transition dynamics of thermoresponsive polymers

(2015) Zhen Li et al.   CHEMICAL COMMUNICATIONS

Transport dissipative particle dynamics model for mesoscopic advection-diffusion-reaction problems

(2015) Zhen Li et al.   JOURNAL OF CHEMICAL PHYSICS

Discrete approach to stochastic parametrization and dimension reduction in nonlinear dynamics

(2015) Alexandre J. Chorin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Energy-conserving dissipative particle dynamics with temperature-dependent properties

(2014) Zhen Li et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Probing red blood cell mechanics, rheology and dynamics with a two-component multi-scale model

(2014) X. Li et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Construction of dissipative particle dynamics models for complex fluids via the Mori–Zwanzig formulation

(2014) Zhen Li et al.   Soft Matter

Coarse-Graining Methods for Computational Biology

(2013) Marissa G. Saunders et al.   Annual Review of Biophysics

Perspective: Coarse-grained models for biomolecular systems

(2013) W. G. Noid   JOURNAL OF CHEMICAL PHYSICS

Microscopic theory of Brownian motion revisited: The Rayleigh model

(2013) Changho Kim et al.   PHYSICAL REVIEW E

Bottom-up construction of interaction models of non-Markovian dissipative particle dynamics

(2013) Yuta Yoshimoto et al.   PHYSICAL REVIEW E

Mesoscale modeling: solving complex flows in biology and biotechnology

(2013) Zachary Grant Mills et al.   TRENDS IN BIOTECHNOLOGY

Frontiers in Molecular Dynamics Simulations of DNA

(2011) Alberto Pérez et al.   ACCOUNTS OF CHEMICAL RESEARCH

A coarse-grained molecular dynamics model for crystalline solids

(2010) Xiantao Li   INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN ENGINEERING

Direct construction of mesoscopic models from microscopic simulations

(2010) Huan Lei et al.   PHYSICAL REVIEW E

Multiscale simulation of soft matter systems

(2009) Christine Peter et al.   FARADAY DISCUSSIONS

Mori–Zwanzig formalism as a practical computational tool

(2009) Carmen Hijón et al.   FARADAY DISCUSSIONS

Rheology, Microstructure and Migration in Brownian Colloidal Suspensions

(2009) Wenxiao Pan et al.   LANGMUIR

Computing generalized Langevin equations and generalized Fokker-Planck equations

(2009) E. Darve et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA