Real-space refinement with DireX: From global fitting to side-chain improvements

Accurate Flexible Fitting of High-Resolution Protein Structures into Cryo-Electron Microscopy Maps Using Coarse-Grained Pseudo-Energy Minimization

(2011) Wenjun Zheng   BIOPHYSICAL JOURNAL

Modeling protein structure at near atomic resolutions with Gorgon

(2011) Matthew L. Baker et al.   JOURNAL OF STRUCTURAL BIOLOGY

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Principles of membrane protein interactions with annular lipids deduced from aquaporin-0 2D crystals

(2010) Richard K Hite et al.   EMBO JOURNAL

Super-resolution biomolecular crystallography with low-resolution data

(2010) Gunnar F. Schröder et al.   NATURE

Mechanism of folding chamber closure in a group II chaperonin

(2010) Junjie Zhang et al.   NATURE

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Inferential Optimization for Simultaneous Fitting of Multiple Components into a CryoEM Map of Their Assembly

(2009) Keren Lasker et al.   JOURNAL OF MOLECULAR BIOLOGY

Flexible Fitting of High-Resolution X-Ray Structures into Cryoelectron Microscopy Maps Using Biased Molecular Dynamics Simulations

(2008) Marek Orzechowski et al.   BIOPHYSICAL JOURNAL

Towards atomic resolution structural determination by single-particle cryo-electron microscopy

(2008) Z Hong Zhou   CURRENT OPINION IN STRUCTURAL BIOLOGY

Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7

(2008) Gerrit Langer et al.   Nature Protocols

Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction

(2008) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

De Novo Backbone Trace of GroEL from Single Particle Electron Cryomicroscopy

(2008) Steven J. Ludtke et al.   STRUCTURE

Protein Structure Fitting and Refinement Guided by Cryo-EM Density

(2008) Maya Topf et al.   STRUCTURE

Flexible Fitting of Atomic Structures into Electron Microscopy Maps Using Molecular Dynamics

(2008) Leonardo G. Trabuco et al.   STRUCTURE