Optical mapping of DNA: Single-molecule-based methods for mapping genomes

DNA manipulation, sorting, and mapping in nanofluidic systems

(2010) Stephen L. Levy et al.   CHEMICAL SOCIETY REVIEWS

DNA in nanochannels—directly visualizing genomic information

(2010) Fredrik Persson et al.   CHEMICAL SOCIETY REVIEWS

Assembly of large genomes using second-generation sequencing

(2010) M. C. Schatz et al.   GENOME RESEARCH

Enzyme-Catalyzed Transfer of a Ketone Group from anS-Adenosylmethionine Analogue: A Tool for the Functional Analysis of Methyltransferases

(2010) Bobby W.K. Lee et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

(2010) Li-Jun Ma et al.   NATURE

Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes

(2010) S. K. Das et al.   NUCLEIC ACIDS RESEARCH

High-resolution human genome structure by single-molecule analysis

(2010) B. Teague et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-molecule denaturation mapping of DNA in nanofluidic channels

(2010) W. Reisner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA fluorocode: A single molecule, optical map of DNA with nanometre resolution

(2010) Robert K. Neely et al.   Chemical Science

Genome assembly reborn: recent computational challenges

(2009) M. Pop   BRIEFINGS IN BIOINFORMATICS

Optical Mapping Reveals a Large Genetic Inversion between Two Methicillin-Resistant Staphylococcus aureus Strains

(2009) S. K. Shukla et al.   JOURNAL OF BACTERIOLOGY

The sequence and de novo assembly of the giant panda genome

(2009) Ruiqiang Li et al.   NATURE

Origins and functional impact of copy number variation in the human genome

(2009) Donald F. Conrad et al.   NATURE

Single-molecule sequencing of an individual human genome

(2009) Dmitry Pushkarev et al.   NATURE BIOTECHNOLOGY

Cytosine-5-methyltransferases add aldehydes to DNA

(2009) Zita Liutkevičiūtė et al.   Nature Chemical Biology

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

REBASE—a database for DNA restriction and modification: enzymes, genes and genomes

(2009) Richard J. Roberts et al.   NUCLEIC ACIDS RESEARCH

Perspectives and Challenges of Emerging Single-Molecule DNA Sequencing Technologies

(2009) Mingsheng Xu et al.   Small

A Single Molecule Scaffold for the Maize Genome

(2009) Shiguo Zhou et al.   PLoS Genetics

The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion

(2009) Jeffrey J. Coleman et al.   PLoS Genetics

Optical mapping discerns genome wide DNA methylation profiles

(2008) Gene E Ananiev et al.   BMC MOLECULAR BIOLOGY

Sequence assembly

(2008) K. Scheibye-Alsing et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Mapping and sequencing of structural variation from eight human genomes

(2008) Jeffrey M. Kidd et al.   NATURE

Single-Molecule DNA Sequencing of a Viral Genome

(2008) T. D. Harris et al.   SCIENCE

Real-Time DNA Sequencing from Single Polymerase Molecules

(2008) J. Eid et al.   SCIENCE

Single-molecule DNA sequencing technologies for future genomics research

(2008) Pushpendra K. Gupta   TRENDS IN BIOTECHNOLOGY

Sequence-specific Methyltransferase-Induced Labelling (SMILing) of plasmid DNA for studying cell transfection

(2007) Falk H.-G. Schmidt et al.   BIOORGANIC & MEDICINAL CHEMISTRY