4.7 Article

Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors

期刊

BIOINFORMATICS
卷 35, 期 5, 页码 723-728

出版社

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bty694

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资金

  1. National Key Plan for Scientific Research and Development of China [2016YFD0500300, 2016YFC1200200]
  2. National Natural Science Foundation of China [31500126, 31671371, 81730064, 81571985, U1603126]
  3. National Science and Technology Major Project [2017ZX10202201]
  4. Chinese Academy of Medical Sciences [2016-I2M-1-005]
  5. Fundamental Research Funds for the Central Universities of China

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Motivation Receptor mediated entry is the first step for viral infection. However, the question of how viruses select receptors remains unanswered. Results Here, by manually curating a high-quality database of 268 pairs of mammalian virus-host receptor interaction, which included 128 unique viral species or sub-species and 119 virus receptors, we found the viral receptors are structurally and functionally diverse, yet they had several common features when compared to other cell membrane proteins: more protein domains, higher level of N-glycosylation, higher ratio of self-interaction and more interaction partners, and higher expression in most tissues of the host. This study could deepen our understanding of virus-receptor interaction.

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