Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms
出版年份 2014 全文链接
标题
Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms
作者
关键词
-
出版物
BIOINFORMATICS
Volume 31, Issue 7, Pages 1093-1101
出版商
Oxford University Press (OUP)
发表日期
2014-11-28
DOI
10.1093/bioinformatics/btu786
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- (2013) Michael C. Bassik et al. CELL
- Understanding the regulatory and transcriptional complexity of the genome through structure
- (2013) T. R. Mercer et al. GENOME RESEARCH
- Mapping functional transcription factor networks from gene expression data
- (2013) B. C. Haynes et al. GENOME RESEARCH
- Construction of human activity-based phosphorylation networks
- (2013) R. H. Newman et al. Molecular Systems Biology
- A compendium of RNA-binding motifs for decoding gene regulation
- (2013) Debashish Ray et al. NATURE
- The Genotype-Tissue Expression (GTEx) project
- (2013) John Lonsdale et al. NATURE GENETICS
- FunCoup 3.0: database of genome-wide functional coupling networks
- (2013) Thomas Schmitt et al. NUCLEIC ACIDS RESEARCH
- Dissection of TBK1 signaling via phosphoproteomics in lung cancer cells
- (2013) J.-Y. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Functional Knowledge Transfer for High-accuracy Prediction of Under-studied Biological Processes
- (2013) Christopher Y. Park et al. PLoS Computational Biology
- Circuitry and Dynamics of Human Transcription Factor Regulatory Networks
- (2012) Shane Neph et al. CELL
- ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- (2012) S. G. Landt et al. GENOME RESEARCH
- An expansive human regulatory lexicon encoded in transcription factor footprints
- (2012) Shane Neph et al. NATURE
- Architecture of the human regulatory network derived from ENCODE data
- (2012) Mark B. Gerstein et al. NATURE
- Wisdom of crowds for robust gene network inference
- (2012) Daniel Marbach et al. NATURE METHODS
- iELM--a web server to explore short linear motif-mediated interactions
- (2012) R. J. Weatheritt et al. NUCLEIC ACIDS RESEARCH
- PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins
- (2012) Pablo Minguez et al. NUCLEIC ACIDS RESEARCH
- IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
- (2012) Aaron K. Wong et al. NUCLEIC ACIDS RESEARCH
- PrePPI: a structure-informed database of protein–protein interactions
- (2012) Qiangfeng Cliff Zhang et al. NUCLEIC ACIDS RESEARCH
- IKBKE is induced by STAT3 and tobacco carcinogen and determines chemosensitivity in non-small cell lung cancer
- (2012) J Guo et al. ONCOGENE
- Development of a High-Throughput Assay for Identifying Inhibitors of TBK1 and IKKε
- (2012) Jessica E. Hutti et al. PLoS One
- A chromatin-modifying function of JNK during stem cell differentiation
- (2011) Vijay K Tiwari et al. NATURE GENETICS
- DOMINE: a comprehensive collection of known and predicted domain-domain interactions
- (2010) Sailu Yellaboina et al. NUCLEIC ACIDS RESEARCH
- The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources
- (2010) M. Gremse et al. NUCLEIC ACIDS RESEARCH
- The BioGRID Interaction Database: 2011 update
- (2010) C. Stark et al. NUCLEIC ACIDS RESEARCH
- The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes
- (2010) Matthew N. McCall et al. NUCLEIC ACIDS RESEARCH
- Large-Scale Discovery and Characterization of Protein Regulatory Motifs in Eukaryotes
- (2010) Daniel S. Lieber et al. PLoS One
- Exploring the human genome with functional maps
- (2009) C. Huttenhower et al. GENOME RESEARCH
- Global networks of functional coupling in eukaryotes from comprehensive data integration
- (2009) A. Alexeyenko et al. GENOME RESEARCH
- ChIP–seq: advantages and challenges of a maturing technology
- (2009) Peter J. Park NATURE REVIEWS GENETICS
- A census of human transcription factors: function, expression and evolution
- (2009) Juan M. Vaquerizas et al. NATURE REVIEWS GENETICS
- The Sleipnir library for computational functional genomics
- (2008) C. Huttenhower et al. BIOINFORMATICS
- PID: the Pathway Interaction Database
- (2008) Carl F. Schaefer et al. NUCLEIC ACIDS RESEARCH
- Predicting Co-Complexed Protein Pairs from Heterogeneous Data
- (2008) Jian Qiu et al. PLoS Computational Biology
- GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function
- (2008) Sara Mostafavi et al. GENOME BIOLOGY
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