Systematic inference of highways of horizontal gene transfer in prokaryotes

A Rooted Net of Life

(2011) David Williams et al.   Biology Direct

Detecting Highways of Horizontal Gene Transfer

(2011) Mukul S. Bansal et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests

(2010) Sophie S Abby et al.   BMC BIOINFORMATICS

SPRIT: Identifying horizontal gene transfer in rooted phylogenetic trees

(2010) Tobias Hill et al.   BMC EVOLUTIONARY BIOLOGY

Simultaneous Identification of Duplications and Lateral Gene Transfers

(2010) A Tofigh et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Sampling Trees from Evolutionary Models

(2010) Klaas Hartmann et al.   SYSTEMATIC BIOLOGY

Inferring and Validating Horizontal Gene Transfer Events Using Bipartition Dissimilarity

(2010) Alix Boc et al.   SYSTEMATIC BIOLOGY

Intertwined Evolutionary Histories of Marine Synechococcus and Prochlorococcus marinus

(2009) Olga Zhaxybayeva et al.   Genome Biology and Evolution

Evidence for an early prokaryotic endosymbiosis

(2009) James A. Lake   NATURE

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

(2009) O. Zhaxybayeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria

(2008) Bastien Boussau et al.   BMC EVOLUTIONARY BIOLOGY

Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes

(2008) Burkhard Becker et al.   BMC EVOLUTIONARY BIOLOGY

Parsimony Score of Phylogenetic Networks: Hardness Results and a Linear-Time Heuristic

(2008) Guohua Jin et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Quartets MaxCut: A Divide and Conquer Quartets Algorithm

(2008) Sagi Snir et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Chlamydiae Has Contributed at Least 55 Genes to Plantae with Predominantly Plastid Functions

(2008) Ahmed Moustafa et al.   PLoS One