MCScanX-transposed: detecting transposed gene duplications based on multiple colinearity scans

Gene body methylation shows distinct patterns associated with different gene origins and duplication modes and has a heterogeneous relationship with gene expression inOryza sativa(rice)

(2013) Yupeng Wang et al.   NEW PHYTOLOGIST

Genome and gene duplications and gene expression divergence: a view from plants

(2012) Yupeng Wang et al.   Annals of the New York Academy of Sciences

Redundancy and rewiring of genetic networks following genome-wide duplication events

(2012) Riet De Smet et al.   CURRENT OPINION IN PLANT BIOLOGY

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

Different Gene Families in Arabidopsis thaliana Transposed in Different Epochs and at Different Frequencies throughout the Rosids

(2011) M. R. Woodhouse et al.   PLANT CELL

Modes of Gene Duplication Contribute Differently to Genetic Novelty and Redundancy, but Show Parallels across Divergent Angiosperms

(2011) Yupeng Wang et al.   PLoS One

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

Insights from the Comparison of Plant Genome Sequences

(2010) Andrew H. Paterson et al.   Annual Review of Plant Biology

Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition

(2009) Michael Freeling   Annual Review of Plant Biology

Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

(2008) H. Tang et al.   GENOME RESEARCH