WaveCNV: allele-specific copy number alterations in primary tumors and xenograft models from next-generation sequencing
出版年份 2013 全文链接
标题
WaveCNV: allele-specific copy number alterations in primary tumors and xenograft models from next-generation sequencing
作者
关键词
-
出版物
BIOINFORMATICS
Volume 30, Issue 6, Pages 768-774
出版商
Oxford University Press (OUP)
发表日期
2013-11-06
DOI
10.1093/bioinformatics/btt611
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- OncoSNP-SEQ: a statistical approach for the identification of somatic copy number alterations from next-generation sequencing of cancer genomes
- (2013) Christopher Yau BIOINFORMATICS
- Xenome--a tool for classifying reads from xenograft samples
- (2012) T. Conway et al. BIOINFORMATICS
- Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes
- (2012) Andrew V. Biankin et al. NATURE
- Absolute quantification of somatic DNA alterations in human cancer
- (2012) Scott L Carter et al. NATURE BIOTECHNOLOGY
- Genome-wide copy number analysis of single cells
- (2012) Timour Baslan et al. Nature Protocols
- cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate
- (2012) Günter Klambauer et al. NUCLEIC ACIDS RESEARCH
- qpure: A Tool to Estimate Tumor Cellularity from Genome-Wide Single-Nucleotide Polymorphism Profiles
- (2012) Sarah Song et al. PLoS One
- CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing
- (2011) A. Abyzov et al. GENOME RESEARCH
- Tumour evolution inferred by single-cell sequencing
- (2011) Nicholas Navin et al. NATURE
- Detecting common copy number variants in high-throughput sequencing data by using JointSLM algorithm
- (2011) Alberto Magi et al. NUCLEIC ACIDS RESEARCH
- ReadDepth: A Parallel R Package for Detecting Copy Number Alterations from Short Sequencing Reads
- (2011) Christopher A. Miller et al. PLoS One
- Development of an Orthotopic Human Pancreatic Cancer Xenograft Model Using Ultrasound Guided Injection of Cells
- (2011) Amanda Shanks Huynh et al. PLoS One
- CNAseg—a novel framework for identification of copy number changes in cancer from second-generation sequencing data
- (2010) Sergii Ivakhno et al. BIOINFORMATICS
- rSW-seq: Algorithm for detection of copy number alterations in deep sequencing data
- (2010) Tae-Min Kim et al. BMC BIOINFORMATICS
- Allele-specific copy number analysis of tumors
- (2010) P. Van Loo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic Inference of Copy-Number Genotypes from Personal Genome Sequencing Data Reveals Extensive Olfactory Receptor Gene Content Diversity
- (2010) Sebastian M. Waszak et al. PLoS Computational Biology
- CNV-seq, a new method to detect copy number variation using high-throughput sequencing
- (2009) Chao Xie et al. BMC BIOINFORMATICS
- Sensitive and accurate detection of copy number variants using read depth of coverage
- (2009) S. Yoon et al. GENOME RESEARCH
- Computational methods for discovering structural variation with next-generation sequencing
- (2009) Paul Medvedev et al. NATURE METHODS
- Integrated study of copy number states and genotype calls using high-density SNP arrays
- (2009) Wei Sun et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started