Automatic 3D neuron tracing using all-path pruning

A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems

(2010) L. Qu et al.   BIOINFORMATICS

Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model

(2010) H. Peng et al.   BIOINFORMATICS

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

(2010) Hanchuan Peng et al.   NATURE BIOTECHNOLOGY

Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain

(2010) A. Li et al.   SCIENCE

Fast linear feature detection using multiple directional non-maximum suppression

(2009) C. SUN et al.   JOURNAL OF MICROSCOPY

Three-dimensional neuron tracing by voxel scooping

(2009) Alfredo Rodriguez et al.   JOURNAL OF NEUROSCIENCE METHODS

The Central Role of Neuroinformatics in the National Academy of Engineering’s Grandest Challenge: Reverse Engineer the Brain

(2009) Badrinath Roysam et al.   NEUROINFORMATICS

MDL Constrained 3-D Grayscale Skeletonization Algorithm for Automated Extraction of Dendrites and Spines from Fluorescence Confocal Images

(2009) Xiaosong Yuan et al.   NEUROINFORMATICS

Live Neuron Morphology Automatically Reconstructed From Multiphoton and Confocal Imaging Data

(2008) Bradley E. Losavio et al.   JOURNAL OF NEUROPHYSIOLOGY

Detection of the optimal neuron traces in confocal microscopy images

(2008) Zlatko Vasilkoski et al.   JOURNAL OF NEUROSCIENCE METHODS

Detection of Retinal Blood Vessels Based on Nonlinear Projections

(2008) Yongping Zhang et al.   Journal of Signal Processing Systems for Signal Image and Video Technology

Using nonlinear diffusion and mean shift to detect and connect cross-sections of axons in 3D optical microscopy images

(2008) Hongmin Cai et al.   MEDICAL IMAGE ANALYSIS

3D Axon Structure Extraction and Analysis in Confocal Fluorescence Microscopy Images

(2008) Yong Zhang et al.   NEURAL COMPUTATION