A detailed investigation of accessibilities around target sites of siRNAs and miRNAs

Genome-wide measurement of RNA secondary structure in yeast

(2010) Michael Kertesz et al.   NATURE

Predictions of RNA secondary structure by combining homologous sequence information

(2009) Michiaki Hamada et al.   BIOINFORMATICS

Reexamining microRNA Site Accessibility in Drosophila: A Population Genomics Study

(2009) Kevin Chen et al.   PLoS One

The Wilcoxon-Mann-Whitney test under scrutiny

(2009) Morten W. Fagerland et al.   STATISTICS IN MEDICINE

Prediction of RNA secondary structure using generalized centroid estimators

(2008) Michiaki Hamada et al.   BIOINFORMATICS

IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions

(2008) Anke Busch et al.   BIOINFORMATICS

Impact of target mRNA structure on siRNA silencing efficiency: A large-scale study

(2008) Joseph A. Gredell et al.   BIOTECHNOLOGY AND BIOENGINEERING

siRNA-mediated Erc gene silencing suppresses tumor growth in Tsc2 mutant renal carcinoma model

(2008) Osamu Imamura et al.   CANCER LETTERS

The impact of target site accessibility on the design of effective siRNAs

(2008) Hakim Tafer et al.   NATURE BIOTECHNOLOGY

Fundamental differences in the equilibrium considerations for siRNA and antisense oligodeoxynucleotide design

(2008) Z. J. Lu et al.   NUCLEIC ACIDS RESEARCH

OligoWalk: an online siRNA design tool utilizing hybridization thermodynamics

(2008) Z. J. Lu et al.   NUCLEIC ACIDS RESEARCH

Centroid estimation in discrete high-dimensional spaces with applications in biology

(2008) L. E. Carvalho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA