Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM

The UCSC Cancer Genomics Browser

(2009) Jingchun Zhu et al.   NATURE METHODS

A novel signaling pathway impact analysis

(2008) Adi Laurentiu Tarca et al.   BIOINFORMATICS

Unraveling the Biologic and Clinical Complexities of HER2

(2008) John W. Park et al.   Clinical Breast Cancer

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

(2008) Roger McLendon et al.   NATURE

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH

An Integrated Genomic Analysis of Human Glioblastoma Multiforme

(2008) D. W. Parsons et al.   SCIENCE