ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment

A survey of available tools and web servers for analysis of protein-protein interactions and interfaces

(2009) N. Tuncbag et al.   BRIEFINGS IN BIOINFORMATICS

Progress and challenges in predicting protein-protein interaction sites

(2009) I. Ezkurdia et al.   BRIEFINGS IN BIOINFORMATICS

RASMOT-3D PRO: a 3D motif search webserver

(2009) Gaëlle Debret et al.   NUCLEIC ACIDS RESEARCH

MolLoc: a web tool for the local structural alignment of molecular surfaces

(2009) S. Angaran et al.   NUCLEIC ACIDS RESEARCH

Searching protein structure databases with DaliLite v.3

(2008) L. Holm et al.   BIOINFORMATICS

FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

(2008) Gabriele Ausiello et al.   BMC BIOINFORMATICS

Protein Surface Conservation in Binding Sites

(2008) Nejc Carl et al.   Journal of Chemical Information and Modeling

MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions

(2008) A. Shulman-Peleg et al.   NUCLEIC ACIDS RESEARCH