Hub genes with positive feedbacks function as master switches in developmental gene regulatory networks

Positive- and negative-feedback regulations coordinate the dynamic behavior of the Ras-Raf-MEK-ERK signal transduction pathway

(2009) S.-Y. Shin et al.   JOURNAL OF CELL SCIENCE

Positive feedback in cellular control systems

(2008) Alexander Y. Mitrophanov et al.   BIOESSAYS

Coherent coupling of feedback loops: a design principle of cell signaling networks

(2008) Yung-Keun Kwon et al.   BIOINFORMATICS

AmiGO: online access to ontology and annotation data

(2008) Seth Carbon et al.   BIOINFORMATICS

Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics

(2008) Yung-Keun Kwon et al.   BIOINFORMATICS

Rank-based edge reconstruction for scale-free genetic regulatory networks

(2008) Guanrao Chen et al.   BMC BIOINFORMATICS

Robustness analysis of cellular memory in an autoactivating positive feedback system

(2008) Zhang Cheng et al.   FEBS LETTERS

FlyBase: enhancing Drosophila Gene Ontology annotations

(2008) S. Tweedie et al.   NUCLEIC ACIDS RESEARCH

Global regulatory logic for specification of an embryonic cell lineage

(2008) P. Oliveri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coupled Feedback Loops Form Dynamic Motifs of Cellular Networks

(2007) Jeong-Rae Kim et al.   BIOPHYSICAL JOURNAL