4.5 Article

Modulating the activity of short arginine-tryptophan containing antibacterial peptides with N-terminal metallocenoyl groups

期刊

BEILSTEIN JOURNAL OF ORGANIC CHEMISTRY
卷 8, 期 -, 页码 1753-1764

出版社

BEILSTEIN-INSTITUT
DOI: 10.3762/bjoc.8.200

关键词

antimicrobial peptides; arginine; medicinal organometallic chemistry; metallocenoyl; peptides; tryptophan

向作者/读者索取更多资源

A series of small synthetic arginine and tryptophan containing peptides was prepared and analyzed for their antibacterial activity. The effect of N-terminal substitution with metallocenoyl groups such as ferrocene (FcCO) and ruthenocene (RcCO) was investigated. Antibacterial activity in different media, growth inhibition, and killing kinetics of the most active peptides were determined. The toxicity of selected derivatives was determined against erythrocytes and three human cancer cell lines. It was shown that the replacement of an N-terminal arginine residue with a metallocenoyl moiety modulates the activity of WRWRW-peptides against Gram-positive and Gram-negative bacteria. MIC values of 2-6 mu M for RcCO-W(RW)(2) and 1-11 mu M for (RW)(3) were determined. Interestingly, W(RW)(2)-peptides derivatized with ferrocene were significantly less active than those derivatized with ruthenocene which have similar structural but different electronic properties, suggesting a major influence of the latter. The high activities observed for the RcCO-W(RW)(2)- and (RW)(3)-peptides led to an investigation of the origin of activity of these peptides using several important activity-related parameters. Firstly, killing kinetics of the RcCO-W(RW)(2)-peptide versus killing kinetics of the (RW)(3) derivative showed faster reduction of the colony forming units for the RcCO-W(RW)(2)-peptide, although MIC values indicated higher activity for the (RW)(3)-peptide. This was confirmed by growth inhibition studies. Secondly, hemolysis studies revealed that both peptides did not lead to significant destruction of erythrocytes, even up to 500 mu g/mL for (RW)(3) and 250 mu g/mL for RcCO-W(RW)(2). In addition, toxicity against three human cancer cell lines (HepG2, HT29, MCF7) showed that the (RW)(3)-peptide had an IC50 value of similar to 140 mu M and the RcW(RW)(2) one of similar to 90 mu M, indicating a potentially interesting therapeutic window. Both the killing kinetics and growth inhibition studies presented in this work point to a membrane-based mode of action for these two peptides, each having different kinetic parameters.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Chemistry, Multidisciplinary

A phototoxic thulium complex exhibiting intracellular ROS production upon 630 nm excitation in cancer cells

Daniel Obitz, Karmel S. Gkika, Marvin Heller, Tia E. Keyes, Nils Metzler-Nolte

Summary: A lanthanide(iii) complex connected to a light harvesting antenna was synthesized and tested as a potential photosensitizer in photodynamic therapy. The complex showed significant phototoxic activity on cancer cells upon irradiation, with ROS production identified as the compound's phototoxic mode of action. In cell viability assays, a 10-fold decrease in IC50 value was observed compared to the dark control.

CHEMICAL COMMUNICATIONS (2023)

Article Chemistry, Inorganic & Nuclear

Synthesis, Characterization and Cytotoxic Activities of Half-sandwich Pentamethylcyclopentadienyl Iridium(III) Complexes Containing 4,4'-substituted 2,2'-Bipyridine Ligands

Marion Graf, Jasmine Ochs, Nils Metzler-Nolte, Peter Mayer, Hans-Christian Bottcher

Summary: This paper describes the synthesis and characterization of six new organometallic half-sandwich iridium(III) compounds with modified bipyridine ligands. The cytotoxic properties of the compounds against two cancer cell lines were evaluated, and compound 3 showed the most remarkable biological activity with significantly enhanced toxicity compared to cisplatin.

ZEITSCHRIFT FUR ANORGANISCHE UND ALLGEMEINE CHEMIE (2023)

Article Chemistry, Multidisciplinary

Next-generation membrane-active glycopeptide antibiotics that also inhibit bacterial cell division

Paramita Sarkar, Kathakali De, Malvika Modi, Geetika Dhanda, Richa Priyadarshini, Julia E. Bandow, Jayanta Haldar

Summary: Resistance to vancomycin requires developing alternative therapeutics. In this study, vancomycin derivatives with mechanisms beyond d-Ala-d-Ala binding were reported. The lead molecule, VanQAmC(10), inhibits bacterial cell division, which is a previously unknown property for glycopeptide antibiotics.

CHEMICAL SCIENCE (2023)

Article Biochemical Research Methods

Improved LC-MS identification of short homologous peptides using sequence-specific retention time predictors

Boudewijn Hollebrands, Jos A. Hageman, Jasper W. van de Sande, Bauke Albada, Hans-Gerd Janssen

Summary: Peptides play a significant role in determining the taste of food products, with their taste impressions depending on the amino acids present and their sequence. Identifying short peptides in foods is challenging, but a method was developed to accurately predict retention times of short peptides using reversed phase separation. By training a model using a combination of peptide descriptors and a newly derived set of amino acid index derived sequence-specific peptide descriptors, the model achieved a high accuracy in predicting retention times and elution order for 93% of the short peptides.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2023)

Article Biochemistry & Molecular Biology

Precise and Controlled Modification of Proteins using Multifunctional Chemical Constructs

Bauke Albada

Summary: Bioconjugation of chemical entities to biologically active proteins has provided valuable insights into cellular processes and yielded innovative therapeutic agents. However, a current challenge lies in efficiently generating uniform conjugates of native proteins in their natural environment. By combining various features of protein-modifying enzymes, artificial constructs have been developed. This review evaluates the current status of this approach, with a focus on the protein-binding anchor, modification chemistry, linker, and suggests the incorporation of trigger-responsive switches for regulating protein modification.

CHEMBIOCHEM (2023)

Article Chemistry, Multidisciplinary

High Rates of Quinone-Alkyne Cycloaddition Reactions are Dictated by Entropic Factors

Johannes A. M. Damen, Jorge Escorihuela, Han Zuilhof, Floris L. van Delft, Bauke Albada

Summary: The rates of reaction between strained cycloalkynes and cycloalkenes with 1,2-quinone were studied using stopped flow UV-Vis spectroscopy and computational analysis. The results showed that strained alkyne BCN OH 3 reacted over 150 times faster than strained alkene TCO-OH 5, and the introduction of a carbamate derivative reduced the rate constant by almost half. Additionally, the 8-membered strained alkyne BCN OH 3 reacted 16 times faster than the more strained 7-membered THS 2. Thermodynamic activation parameters were determined using the linearized Eyring equation, providing valuable insights into these rapid click reactions.

CHEMISTRY-A EUROPEAN JOURNAL (2023)

Article Chemistry, Medicinal

A Reinvestigation of the Role of the Sorbic Acid Tail on the Antibacterial and Anti-Tuberculosis Properties of Moiramide B

Irina Kollmorgen, Nathalie Bachmann, Michael Dal Molin, Carsten Degenhart, Eldar Zent, Vikram Pareek, Uwe Koch, Jan Rybniker, Nils Metzler-Nolte, Raphael Stoll, Bert Klebl, Julia Elisabeth Bandow, Jurgen Scherkenbeck

Summary: Due to increasing resistances, there is a need for antibacterial compounds with unique modes of action. One such compound, moiramide B, shows strong activity against gram-positive bacteria but weaker activity against gram-negative bacteria. The structure-activity relationship of moiramide B presents a challenge for optimization strategies, while the fatty acid tail is considered as a transport vehicle. However, the sorbic acid unit is found to be relevant for ACC inhibition and allows the development of moiramide derivatives with altered antibacterial profiles.

CHEMMEDCHEM (2023)

Article Chemistry, Organic

Chemical Synthesis of Glycopeptides containing L-Arabinosylated Hydroxyproline and Sulfated Tyrosine

Jasper W. van de Sande, Bauke Albada

Summary: The researchers reported the total synthesis of post-translationally modified peptides, including beta-1,2-linked L-arabinosylated Fmoc-protected hydroxyproline building blocks and sulfated tyrosine and hydroxyproline, which are important regulating molecules for living organisms. Clean glycopeptides were obtained by removing acetyl groups from the L-arabinose and neopentyl-protected sulfated tyrosine before deprotection.

ORGANIC LETTERS (2023)

Article Biochemical Research Methods

Physiology of trans-translation deficiency in Bacillus subtilis - a comparative proteomics study

Melissa Vazquez-Hernandez, Stephanie L. Leedom, Kenneth C. Keiler, Julia Elisabeth Bandow

Summary: Trans-translation is the most effective ribosome rescue system in bacteria, but Bacillus subtilis possesses two alternative ribosome rescue mechanisms. In this study, the proteomes of B. subtilis 168 and a ssrA mutant were compared using quantitative proteomics. The mutant strain showed lower growth rate and protein synthesis rates, altered motility and chemotaxis phenotype, and alterations in the abundance of ribosomal proteins and proteins related to amino acid biosynthesis, reflecting slow ribosome recycling.

PROTEOMICS (2023)

Article Infectious Diseases

Characterization of the Antibacterial Activity of Quinone-Based Compounds Originating from the Alnumycin Biosynthetic Gene Cluster of a Streptomyces Isolate

Leonie Sagurna, Sascha Heinrich, Lara-Sophie Kaufmann, Christian Rueckert-Reed, Tobias Busche, Alexander Wolf, Jan Eickhoff, Bert Klebl, Joern Kalinowski, Julia E. Bandow

Summary: Bacteria of the genus Streptomyces produce various specialized metabolites. Single biosynthetic gene clusters (BGCs) can give rise to different products with varying biological activities. In this study, alnumycin and 1,6-dihydro 8-propylanthraquinone were isolated from a Streptomyces strain containing the alnumycin BGC. Both compounds exhibited antimicrobial activity, with 1,6-dihydro 8-propylanthraquinone showing higher activity against E. coli & UDelta;tolC compared to alnumycin. The modes of action of these compounds are worth further investigation.

ANTIBIOTICS-BASEL (2023)

Article Chemistry, Multidisciplinary

Design, Synthesis, Molecular Modeling, Biological Activity, and Mechanism of Action of Novel Amino Acid Derivatives of Norfloxacin

Ahmed M. Kamal El-sagheir, Ireny Abdelmesseh Nekhala, Mohammed K. Abd El-Gaber, Ahmed S. Aboraia, Jonatan Persson, Ann-Britt Schafer, Michaela Wenzel, Farghaly A. Omar

Summary: In this study, 24 new derivatives of norfloxacin were synthesized, which showed enhanced antibacterial activity and the ability to establish additional bonds with target enzymes. The derivatives exhibited significant inhibition of bacterial cells both in vitro and in living organisms. Some derivatives also showed effects on cell wall synthesis and/or the cytoplasmic membrane, contributing to their increased antibacterial activity.

ACS OMEGA (2023)

Review Biochemistry & Molecular Biology

DNA G-quadruplex-stabilizing metal complexes as anticancer drugs

Jaccoline Zegers, Maartje Peters, Bauke Albada

Summary: This article summarizes the importance of stabilizing guanine quadruplexes (G4s) for cancer treatment and explores the methods and techniques for stabilizing G4s using metal complexes. By analyzing the G4-stabilizing capacity and bioactivity data of 74 metal-based ligands, guidelines for future studies in this field are proposed.

JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY (2023)

Article Multidisciplinary Sciences

The cold atmospheric pressure plasma-generated species superoxide, singlet oxygen and atomic oxygen activate the molecular chaperone Hsp33

Tim Dirks, Marco Krewing, Katharina Vogel, Julia E. Bandow

Summary: Cold atmospheric pressure plasmas have a significant impact on protein aggregation, and Hsp33 plays an important role in preventing protein aggregation. It has been found that over-production of Hsp33 can increase bacterial resistance to cold plasmas.

JOURNAL OF THE ROYAL SOCIETY INTERFACE (2023)

Article Multidisciplinary Sciences

Immobilization protects enzymes from plasma-mediated inactivation

Tim Dirks, Abdulkadir Yayci, Sabrina Klopsch, Marco Krewing, Wuyuan Zhang, Frank Hollmann, Julia E. Bandow

Summary: This study demonstrates that immobilization universally protects enzymes under plasma-operating conditions and improves their activity, opening up new possibilities for emerging applications.

JOURNAL OF THE ROYAL SOCIETY INTERFACE (2023)

Article Biochemistry & Molecular Biology

Rational design, synthesis, molecular modeling, biological activity, and mechanism of action of polypharmacological norfloxacin hydroxamic acid derivatives

Ahmed M. Kamal El-sagheir, Ireny Abdelmesseh Nekhala, Mohammed K. Abd El-Gaber, Ahmed S. Aboraia, Jonatan Persson, Ann-Britt Schaefer, Michaela Wenzel, Farghaly A. Omar

Summary: This study synthesized novel norfloxacin hydroxamic acid derivatives with additional metal-chelating and hydrophobic pharmacophores. The compounds showed equal or better activity than norfloxacin against various bacteria, and further investigations revealed their inhibition of gyrase and topoisomerase IV, as well as polypharmacological effects on peptidoglycan synthesis.

RSC MEDICINAL CHEMISTRY (2023)

暂无数据