Systems metabolic engineering in an industrial setting

Quantitative NMR for bioanalysis and metabolomics

(2012) Gregory A. Barding et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Current trends and challenges in sample preparation for global metabolomics using liquid chromatography–mass spectrometry

(2012) Dajana Vuckovic   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Codon-optimized glucoamylase sGAI of Aspergillus awamori improves starch utilization in an industrial yeast

(2012) Lorenzo Favaro et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Microbial d-xylonate production

(2012) Mervi H. Toivari et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Synthetic biology devices as tools for metabolic engineering

(2012) Eric Shiue et al.   BIOCHEMICAL ENGINEERING JOURNAL

Production of soluble recombinant proteins in Escherichia coli: Effects of process conditions and chaperone co-expression on cell growth and production of xylanase

(2012) Kamna Jhamb et al.   BIORESOURCE TECHNOLOGY

A computational framework for the design of optimal protein synthesis

(2012) Julien Racle et al.   BIOTECHNOLOGY AND BIOENGINEERING

Co-expression of the small heat shock protein, Lo18, with β-glucosidase in Escherichia coli improves solubilization and reveals various associations with overproduced heterologous protein, GroEL/ES

(2012) Florian Ronez et al.   BIOTECHNOLOGY LETTERS

Leading the way: finding genes for neurologic disease in dogs using genome-wide mRNA sequencing

(2012) Elaine A Ostrander et al.   BMC GENETICS

A new RNASeq-based reference transcriptome for sugar beet and its application in transcriptome-scale analysis of vernalization and gibberellin responses

(2012) Effie S Mutasa-Göttgens et al.   BMC GENOMICS

Metabolic Regulation of Epigenetics

(2012) Chao Lu et al.   Cell Metabolism

Mass spectrometry-based proteomics: existing capabilities and future directions

(2012) Thomas E. Angel et al.   CHEMICAL SOCIETY REVIEWS

Hochparallele Bioprozessentwicklung in geschüttelten Mikrobioreaktoren

(2012) Pamela Wenk et al.   CHEMIE INGENIEUR TECHNIK

Harnessing glycomics technologies: Integrating structure with function for glycan characterization

(2012) Luke N. Robinson et al.   ELECTROPHORESIS

Metabolomics methods for the synthetic biology of secondary metabolism

(2012) Quoc-Thai Nguyen et al.   FEBS LETTERS

Efficient key pathway mining: combining networks and OMICS data

(2012) Nicolas Alcaraz et al.   Integrative Biology

Spatially Resolving the Secretome within the Mycelium of the Cell Factory Aspergillus niger

(2012) Pauline Krijgsheld et al.   JOURNAL OF PROTEOME RESEARCH

Microbial engineering for the production of advanced biofuels

(2012) Pamela P. Peralta-Yahya et al.   NATURE

Systems metabolic engineering of microorganisms for natural and non-natural chemicals

(2012) Jeong Wook Lee et al.   Nature Chemical Biology

Next-generation proteomics: towards an integrative view of proteome dynamics

(2012) A. F. Maarten Altelaar et al.   NATURE REVIEWS GENETICS

O-miner: an integrative platform for automated analysis and mining of -omics data

(2012) R. J. Cutts et al.   NUCLEIC ACIDS RESEARCH

Selective Heterogeneity in Exoprotease Production by Bacillus subtilis

(2012) Fordyce A. Davidson et al.   PLoS One

Phospholipases C and sphingomyelinases: Lipids as substrates and modulators of enzyme activity

(2012) Félix M. Goñi et al.   PROGRESS IN LIPID RESEARCH

Codon optimization for high level expression of human bone morphogenetic protein – 2 in Escherichia coli

(2012) Debbie S. Retnoningrum et al.   PROTEIN EXPRESSION AND PURIFICATION

Use and Abuse of RNAi to Study Mammalian Gene Function

(2012) W. G. Kaelin   SCIENCE

A dynamic perspective of RNAi library development

(2012) Qiuwei Pan et al.   TRENDS IN BIOTECHNOLOGY

Coping with complexity in metabolic engineering

(2012) Joerg Mampel et al.   TRENDS IN BIOTECHNOLOGY

Subcellular localization of RNA and proteins in prokaryotes

(2012) Keren Nevo-Dinur et al.   TRENDS IN GENETICS

Modern analytical techniques in metabolomics analysis

(2011) Aihua Zhang et al.   ANALYST

Experimental methods and modeling techniques for description of cell population heterogeneity

(2011) R. Lencastre Fernandes et al.   BIOTECHNOLOGY ADVANCES

Taxol-induced alteration of intracellular amino-acid profile related to human cervical carcinoma HeLa cell death

(2011) Xiao-Fei Han et al.   BIOTECHNOLOGY LETTERS

A new microfluidic concept for parallel operated milliliter-scale stirred tank bioreactors

(2011) Gabi Gebhardt et al.   BIOTECHNOLOGY PROGRESS

Mass spectrometry-based proteomics for systems biology

(2011) Eduard Sabidó et al.   CURRENT OPINION IN BIOTECHNOLOGY

Genome-wide analytical approaches for reverse metabolic engineering of industrially relevant phenotypes in yeast

(2011) Bart Oud et al.   FEMS YEAST RESEARCH

Optimization of cold methanol quenching for quantitative metabolomics of Penicillium chrysogenum

(2011) Lodewijk P. de Jonge et al.   Metabolomics

Engineering Biological Systems with Synthetic RNA Molecules

(2011) Joe C. Liang et al.   MOLECULAR CELL

Systems metabolic engineering for chemicals and materials

(2011) Jeong Wook Lee et al.   TRENDS IN BIOTECHNOLOGY

Single cell transcriptomics of neighboring hyphae of Aspergillus niger

(2011) Charissa de Bekker et al.   GENOME BIOLOGY

Engineering inhibitor tolerance for the production of biorenewable fuels and chemicals

(2011) Laura R Jarboe et al.   Current Opinion in Chemical Engineering

Heterogeneity ofAspergillus nigerMicrocolonies in Liquid Shaken Cultures

(2010) Charissa de Bekker et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A review of advanced small-scale parallel bioreactor technology for accelerated process development: Current state and future need

(2010) Rachel Bareither et al.   BIOTECHNOLOGY PROGRESS

Heterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus niger colonies

(2010) Arman Vinck et al.   ENVIRONMENTAL MICROBIOLOGY

New dimensionality reduction methods for the representation of high dimensional ‘omics’ data

(2010) Christophe Bécavin et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

The changing face of dairy starter culture research: From genomics to economics

(2010) SUSAN MILLS et al.   INTERNATIONAL JOURNAL OF DAIRY TECHNOLOGY

Visualization of omics data for systems biology

(2010) Nils Gehlenborg et al.   NATURE METHODS

Application of microbioreactors in fermentation process development: a review

(2009) Daniel Schäpper et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Peroxicretion: a novel secretion pathway in the eukaryotic cell

(2009) Cees MJ Sagt et al.   BMC BIOTECHNOLOGY

Lipid rafts/caveolae as microdomains of calcium signaling

(2009) Biswaranjan Pani et al.   CELL CALCIUM

Genome engineering

(2009) Peter A Carr et al.   NATURE BIOTECHNOLOGY

Importance of systems biology in engineering microbes for biofuel production

(2008) Aindrila Mukhopadhyay et al.   CURRENT OPINION IN BIOTECHNOLOGY

Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics

(2008) Denise I. Jacobs et al.   FUNGAL GENETICS AND BIOLOGY

Genome and proteome annotation: organization, interpretation and integration

(2008) G. A Reeves et al.   Journal of the Royal Society Interface