Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume

Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution

(2014) Mikhail Tikhonov et al.   ISME Journal

Host-specificity among abundant and rare taxa in the sponge microbiome

(2014) Julie Reveillaud et al.   ISME Journal

The rise and fall of methanotrophy following a deepwater oil-well blowout

(2014) M. Crespo-Medina et al.   Nature Geoscience

Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill

(2014) Olivia U. Mason et al.   Frontiers in Microbiology

Sewage reflects the distribution of human faecalLachnospiraceae

(2013) Sandra L. McLellan et al.   ENVIRONMENTAL MICROBIOLOGY

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill

(2012) Jacob Baelum et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution andin situabundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

(2012) Sara Kleindienst et al.   ENVIRONMENTAL MICROBIOLOGY

Alteromonas As a Key Agent of Polycyclic Aromatic Hydrocarbon Biodegradation in Crude Oil-Contaminated Coastal Sediment

(2012) Hyun Mi Jin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill

(2012) Olivia U Mason et al.   ISME Journal

Microbial communities in the subglacial waters of the Vatnajökull ice cap, Iceland

(2012) Viggó Thór Marteinsson et al.   ISME Journal

Complete Genome Sequence of the Pyrene-Degrading Bacterium Cycloclasticus sp. Strain P1

(2012) Qiliang Lai et al.   JOURNAL OF BACTERIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Comparative Genomics Reveals Adaptation by Alteromonas sp. SN2 to Marine Tidal-Flat Conditions: Cold Tolerance and Aromatic Hydrocarbon Metabolism

(2012) Renukaradhya K. Math et al.   PLoS One

Dynamic autoinoculation and the microbial ecology of a deep water hydrocarbon irruption

(2012) D. L. Valentine et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fate of Dispersants Associated with the Deepwater Horizon Oil Spill

(2011) Elizabeth B. Kujawinski et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Formation dynamics of subsurface hydrocarbon intrusions following the Deepwater Horizon blowout

(2011) Scott A. Socolofsky et al.   GEOPHYSICAL RESEARCH LETTERS

Magnitude and oxidation potential of hydrocarbon gases released from the BP oil well blowout

(2011) Samantha B. Joye et al.   Nature Geoscience

Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration

(2011) Laura Steindler et al.   PLoS One

Exploring the Diversity of Gardnerella vaginalis in the Genitourinary Tract Microbiota of Monogamous Couples Through Subtle Nucleotide Variation

(2011) A. Murat Eren et al.   PLoS One

Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill

(2011) C. M. Reddy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Review of flow rate estimates of the Deepwater Horizon oil spill

(2011) M. K. McNutt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill

(2011) M. C. Redmond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comment on "A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico"

(2011) S. B. Joye et al.   SCIENCE

A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico

(2011) J. D. Kessler et al.   SCIENCE

Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean

(2011) B. K. Swan et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Cold-seep carbonates of the middle and lower continental slope, northern Gulf of Mexico

(2010) Harry H. Roberts et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments

(2010) Beth N. Orcutt et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Biogeochemical signatures and microbial activity of different cold-seep habitats along the Gulf of Mexico deep slope

(2010) Samantha B. Joye et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Weak coupling between sulfate reduction and the anaerobic oxidation of methane in methane-rich seafloor sediments during ex situ incubation

(2010) Marshall W. Bowles et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Characterization of subsurface polycyclic aromatic hydrocarbons at the Deepwater Horizon site

(2010) Arne-R. Diercks et al.   GEOPHYSICAL RESEARCH LETTERS

Spatial Structure and Activity of Sedimentary Microbial Communities Underlying a Beggiatoa spp. Mat in a Gulf of Mexico Hydrocarbon Seep

(2010) Karen G. Lloyd et al.   PLoS One

Tracking Hydrocarbon Plume Transport and Biodegradation at Deepwater Horizon

(2010) Richard Camilli et al.   SCIENCE

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Propane Respiration Jump-Starts Microbial Response to a Deep Oil Spill

(2010) David L. Valentine et al.   SCIENCE

Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre

(2009) Alexander Eiler et al.   ENVIRONMENTAL MICROBIOLOGY

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Growth rates of different phylogenetic bacterioplankton groups in a coastal upwelling system

(2009) Eva Teira et al.   Environmental Microbiology Reports

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

(2008) Susan M. Huse et al.   PLoS Genetics