SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between theMethylococcaceaeand theMethylophilaceae

(2013) David A.C. Beck et al.   PeerJ

Structure, fluctuation and magnitude of a natural grassland soil metagenome

(2012) Tom O Delmont et al.   ISME Journal

On-line detection of root-induced volatiles in Brassica nigra plants infested with Delia radicum L. root fly larvae

(2012) Elena Crespo et al.   PHYTOCHEMISTRY

Ray Meta: scalable de novo metagenome assembly and profiling

(2012) Sébastien Boisvert et al.   GENOME BIOLOGY

Methylotrophy in a Lake: from Metagenomics to Single-Organism Physiology

(2011) Ludmila Chistoserdova   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Modularity of methylotrophy, revisited

(2011) Ludmila Chistoserdova   ENVIRONMENTAL MICROBIOLOGY

An updated climatology of surface dimethlysulfide concentrations and emission fluxes in the global ocean

(2011) A. Lana et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae

(2011) A. Lapidus et al.   JOURNAL OF BACTERIOLOGY

Purification and Characterization of Dimethylsulfide Monooxygenase from Hyphomicrobium sulfonivorans

(2011) R. Boden et al.   JOURNAL OF BACTERIOLOGY

The case against climate regulation via oceanic phytoplankton sulphur emissions

(2011) P. K. Quinn et al.   NATURE

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

DNA-Stable Isotope Probing Integrated with Metagenomics for Retrieval of Biphenyl Dioxygenase Genes from Polychlorinated Biphenyl-Contaminated River Sediment

(2009) W. J. Sul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial degradation of dimethylsulphide and related C1-sulphur compounds: organisms and pathways controlling fluxes of sulphur in the biosphere

(2009) H. Schafer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Impact of sideways and bottom-up control factors on bacterial community succession over a tidal cycle

(2009) A. Chauhan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Substrate-Specific Clades of Active Marine Methylotrophs Associated with a Phytoplankton Bloom in a Temperate Coastal Environment

(2008) J. D. Neufeld et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics

(2008) Josh D. Neufeld et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular diversity of bacterial production of the climate-changing gas, dimethyl sulphide, a molecule that impinges on local and global symbioses

(2008) A. W. B. Johnston et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-resolution metagenomics targets specific functional types in complex microbial communities

(2008) Marina G Kalyuzhnaya et al.   NATURE BIOTECHNOLOGY