Pyrosequencing ofmcrAand Archaeal 16S rRNA Genes Reveals Diversity and Substrate Preferences of Methanogen Communities in Anaerobic Digesters

Metagenomic analysis of sludge from full-scale anaerobic digesters operated in municipal wastewater treatment plants

(2014) Ying Yang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Substrate induced emergence of different active bacterial and archaeal assemblages during biomethane production

(2013) Xiaoying Lu et al.   BIORESOURCE TECHNOLOGY

Methanosarcina domination in anaerobic sequencing batch reactor at short hydraulic retention time

(2013) Jingwei Ma et al.   BIORESOURCE TECHNOLOGY

Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques

(2013) Inka Vanwonterghem et al.   CURRENT OPINION IN BIOTECHNOLOGY

Phylogenomic Data Support a Seventh Order of Methylotrophic Methanogens and Provide Insights into the Evolution of Methanogenesis

(2013) Guillaume Borrel et al.   Genome Biology and Evolution

Candidatus Methanogranum caenicola: a Novel Methanogen from the Anaerobic Digested Sludge, and Proposal of Methanomassiliicoccaceae fam. nov. and Methanomassiliicoccales ord. nov., for a Methanogenic Lineage of the Class Thermoplasmata

(2013) Takao Iino et al.   MICROBES AND ENVIRONMENTS

Methyl Coenzyme M Reductase A (mcrA) Gene-Based Investigation of Methanogens in the Mudflat Sediments of Yangtze River Estuary, China

(2013) Jemaneh Zeleke et al.   MICROBIAL ECOLOGY

Microbial diversity and dynamics during methane production from municipal solid waste

(2013) Christopher A. Bareither et al.   WASTE MANAGEMENT

FunGene: the functional gene pipeline and repository

(2013) Jordan A. Fish et al.   Frontiers in Microbiology

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome Sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a Methanogenic Archaeon from the Human Gut Belonging to a Seventh Order of Methanogens

(2012) G. Borrel et al.   JOURNAL OF BACTERIOLOGY

Application of a real-time qPCR method to measure the methanogen concentration during anaerobic digestion as an indicator of biogas production capacity

(2012) Deborah Traversi et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Hydrogen-limited growth of hyperthermophilic methanogens at deep-sea hydrothermal vents

(2012) H. C. Ver Eecke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Archaea in Yellowstone Lake

(2011) Jinjun Kan et al.   ISME Journal

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Field guide to next-generation DNA sequencers

(2011) TRAVIS C. GLENN   Molecular Ecology Resources

Bacterial community structures are unique and resilient in full-scale bioenergy systems

(2011) J. J. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A meta-analysis of the microbial diversity observed in anaerobic digesters

(2010) Michael C. Nelson et al.   BIORESOURCE TECHNOLOGY

Diversity of methanogenic archaea in a biogas reactor fed with swine feces as the mono-substrate by mcrA analysis

(2010) Chenguang Zhu et al.   MICROBIOLOGICAL RESEARCH

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Methanospirillum lacunae sp. nov., a methane-producing archaeon isolated from a puddly soil, and emended descriptions of the genus Methanospirillum and Methanospirillum hungatei

(2009) T. Iino et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge

(2009) Delphine Rivière et al.   ISME Journal

Comparative studies of microbial populations in the rumen, duodenum, ileum and faeces of lactating dairy cows

(2009) J.C. Frey et al.   JOURNAL OF APPLIED MICROBIOLOGY

Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing

(2009) Magdalena Kröber et al.   JOURNAL OF BIOTECHNOLOGY

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea

(2008) Yuchen Liu et al.   Annals of the New York Academy of Sciences

Phylogenetic Comparison of the Methanogenic Communities from an Acidic, Oligotrophic Fen and an Anaerobic Digester Treating Municipal Wastewater Sludge

(2008) L. M. Steinberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Investigation of methanogen population structure in biogas reactor by molecular characterization of methyl-coenzyme M reductase A (mcrA) genes

(2008) Gurdeep Rastogi et al.   BIORESOURCE TECHNOLOGY

Quantification of mcrA by fluorescent PCR in methanogenic and methanotrophic microbial communities

(2008) Takuro Nunoura et al.   FEMS MICROBIOLOGY ECOLOGY

Methanolinea tarda gen. nov., sp. nov., a methane-producing archaeon isolated from a methanogenic digester sludge

(2008) H. Imachi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Archaea diversity within a commercial biogas plant utilizing herbal biomass determined by 16S rDNA andmcrA analysis

(2008) E. Nettmann et al.   JOURNAL OF APPLIED MICROBIOLOGY