Correlating Microbial Diversity Patterns with Geochemistry in an Extreme and Heterogeneous Environment of Mine Tailings

Shifts in microbial community composition and function in the acidification of a lead/zinc mine tailings

(2013) Lin-xing Chen et al.   ENVIRONMENTAL MICROBIOLOGY

Metal Mobilization by Iron- and Sulfur-Oxidizing Bacteria in a Multiple Extreme Mine Tailings in the Atacama Desert, Chile

(2013) H. Korehi et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Abiotic Factors Shape Microbial Diversity in Sonoran Desert Soils

(2012) David R. Andrew et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau

(2012) Jinbo Xiong et al.   ENVIRONMENTAL MICROBIOLOGY

Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles

(2012) D. Barrie Johnson   HYDROMETALLURGY

Column bioleaching of low-grade copper ore by Acidithiobacillus ferrooxidans in pure and mixed cultures with a heterotrophic acidophile Acidiphilium sp.

(2012) Yu Yang et al.   HYDROMETALLURGY

Contemporary environmental variation determines microbial diversity patterns in acid mine drainage

(2012) Jia-Liang Kuang et al.   ISME Journal

Predicting bacterial community assemblages using an artificial neural network approach

(2012) Peter E Larsen et al.   NATURE METHODS

Inferring Correlation Networks from Genomic Survey Data

(2012) Jonathan Friedman et al.   PLoS Computational Biology

Spatial and Temporal Analysis of the Microbial Community in the Tailings of a Pb-Zn Mine Generating Acidic Drainage

(2011) Li-Nan Huang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial communities associated with a mineral weathering profile at a sulphidic mine tailings dump in arid Western Australia

(2011) Steven A. Wakelin et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial salt tolerance is unrelated to soil salinity across an arid agroecosystem salinity gradient

(2011) Johannes Rousk et al.   SOIL BIOLOGY & BIOCHEMISTRY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Life in blue: Copper resistance mechanisms of bacteria and Archaea used in industrial biomining of minerals

(2010) Alvaro Orell et al.   BIOTECHNOLOGY ADVANCES

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Growth response of the bacterial community to pH in soils differing in pH

(2010) David Fernández-Calviño et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial community structure across the tree of life in the extreme Río Tinto

(2010) Linda A Amaral-Zettler et al.   ISME Journal

Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments

(2010) Emily B Hollister et al.   ISME Journal

Examining the global distribution of dominant archaeal populations in soil

(2010) Scott T Bates et al.   ISME Journal

Novel polymerase chain reaction primers for the specific detection of bacterial copper P-type ATPases gene sequences in environmental isolates and metagenomic DNA

(2010) R. De la Iglesia et al.   LETTERS IN APPLIED MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Bar-Coded Pyrosequencing Reveals Shared Bacterial Community Properties along the Temperature Gradients of Two Alkaline Hot Springs in Yellowstone National Park

(2009) S. R. Miller et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biofilm Bacterial Community Structure in Streams Affected by Acid Mine Drainage

(2009) G. Lear et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

(2009) J. Rousk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in lead and zinc lability during weathering-induced acidification of desert mine tailings: Coupling chemical and micro-scale analyses

(2009) Sarah M. Hayes et al.   APPLIED GEOCHEMISTRY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Ecology of the rare microbial biosphere of the Arctic Ocean

(2009) Pierre E. Galand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distilling Free-Form Natural Laws from Experimental Data

(2009) Michael Schmidt et al.   SCIENCE

Characterization of a Bacterial Community in an Abandoned Semiarid Lead-Zinc Mine Tailing Site

(2008) M. O. Mendez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

TOXICITY OF SELECT ORGANIC ACIDS TO THE SLIGHTLY THERMOPHILIC ACIDOPHILE ACIDITHIOBACILLUS CALDUS

(2008) John E. Aston et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

Culturable and molecular phylogenetic diversity of microorganisms in an open-dumped, extremely acidic Pb/Zn mine tailings

(2008) Gui-Liang Tan et al.   EXTREMOPHILES

Comparison of selected characteristics of Sulfobacillus species and review of their occurrence in acidic and bioleaching environments

(2008) H.R. Watling et al.   HYDROMETALLURGY

A Unique Combination of Genetic Systems for the Synthesis of Trehalose in Rubrobacter xylanophilus: Properties of a Rare Actinobacterial TreT

(2008) A. Nobre et al.   JOURNAL OF BACTERIOLOGY

Effects of water potential on spore germination and viability of Fusarium species

(2008) D. Palmero Llamas et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Metals tolerance in moderately thermophilic isolates from a spent copper sulfide heap, closely related to Acidithiobacillus caldus, Acidimicrobium ferrooxidans and Sulfobacillus thermosulfidooxidans

(2008) E. L. J. Watkin et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY