Genome sequencing of rumen bacteria and archaea and its application to methane mitigation strategies

Nutritional and host effects on methanogenesis in the grazing ruminant

(2012) H. Clark   Animal

Rumen microbial (meta)genomics and its application to ruminant production

(2012) D. P. Morgavi et al.   Animal

Diversity of gut methanogens in herbivorous animals

(2012) B. St-Pierre et al.   Animal

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of Phenotypic Residual Feed Intake and Dietary Forage Content on the Rumen Microbial Community of Beef Cattle

(2012) Ciara A. Carberry et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Draft Genome Sequence of Treponema sp. Strain JC4, a Novel Spirochete Isolated from the Bovine Rumen

(2012) C. P. Rosewarne et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Oscillibacter ruminantium Strain GH1, Isolated from Rumen of Korean Native Cattle

(2012) G.-H. Lee et al.   JOURNAL OF BACTERIOLOGY

Effect of media composition, including gelling agents, on isolation of previously uncultured rumen bacteria

(2012) T. Nyonyo et al.   LETTERS IN APPLIED MICROBIOLOGY

Methanogen Colonisation Does Not Significantly Alter Acetogen Diversity in Lambs Isolated 17 h After Birth and Raised Aseptically

(2012) Emma J. Gagen et al.   MICROBIAL ECOLOGY

Structural vaccinology starts to deliver

(2012) Philip R. Dormitzer et al.   NATURE REVIEWS MICROBIOLOGY

Next Generation Sequencing to Define Prokaryotic and Fungal Diversity in the Bovine Rumen

(2012) Derrick E. Fouts et al.   PLoS One

Impact of Feed Efficiency and Diet on Adaptive Variations in the Bacterial Community in the Rumen Fluid of Cattle

(2011) Emma Hernandez-Sanabria et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome

(2011) Margret E. Berg Miller et al.   ENVIRONMENTAL MICROBIOLOGY

Status of the phylogenetic diversity census of ruminal microbiomes

(2011) Minseok Kim et al.   FEMS MICROBIOLOGY ECOLOGY

RUMINANT NUTRITION SYMPOSIUM: Productivity, digestion, and health responses to hindgut acidosis in ruminants1

(2011) T. F. Gressley et al.   JOURNAL OF ANIMAL SCIENCE

Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7

(2011) G. Suen et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of the Ruminal Bacterium Megasphaera elsdenii

(2011) H. Marx et al.   JOURNAL OF BACTERIOLOGY

Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts

(2011) Brian M Forde et al.   Microbial Cell Factories

The Complete Genome Sequence of Fibrobacter succinogenes S85 Reveals a Cellulolytic and Metabolic Specialist

(2011) Garret Suen et al.   PLoS One

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

Developing vaccines to control protozoan parasites in ruminants: Dead or alive?

(2011) Elisabeth A. Innes et al.   VETERINARY PARASITOLOGY

Evolutionary adaptations of ruminants and their potential relevance for modern production systems

(2010) M. Clauss et al.   Animal

Molecular Monitoring and Isolation of Previously Uncultured Bacterial Strains from the Sheep Rumen

(2010) S. Koike et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Influence of the Composition of the Cellulolytic Flora on the Development of Hydrogenotrophic Microorganisms, Hydrogen Utilization, and Methane Production in the Rumens of Gnotobiotically Reared Lambs

(2010) F. Chaucheyras-Durand et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of Variation in Rumen Methanogenic Communities under Different Dietary and Host Feed Efficiency Conditions, as Determined by PCR-Denaturing Gradient Gel Electrophoresis Analysis

(2010) M. Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Presence of Novel, Potentially Homoacetogenic Bacteria in the Rumen as Determined by Analysis of Formyltetrahydrofolate Synthetase Sequences from Ruminants

(2010) G. Henderson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A genomic perspective on the potential of Actinobacillus succinogenes for industrial succinate production

(2010) James B McKinlay et al.   BMC GENOMICS

Transcriptomic Analyses of Xylan Degradation byPrevotella bryantiiand Insights into Energy Acquisition by Xylanolytic Bacteroidetes

(2010) Dylan Dodd et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Isolation of previously uncultured rumen bacteria by dilution to extinction using a new liquid culture medium

(2010) Nikki Kenters et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche

(2010) Janaki Purushe et al.   MICROBIAL ECOLOGY

The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions

(2010) Sinead C. Leahy et al.   PLoS One

The Glycobiome of the Rumen Bacterium Butyrivibrio proteoclasticus B316T Highlights Adaptation to a Polysaccharide-Rich Environment

(2010) William J. Kelly et al.   PLoS One

Strategies to reduce methane emissions from farmed ruminants grazing on pasture

(2010) Bryce M. Buddle et al.   VETERINARY JOURNAL

Methane mitigation in ruminants: from microbe to the farm scale

(2009) C. Martin et al.   Animal

Cultivation of Methanogens under Low-Hydrogen Conditions by Using the Coculture Method

(2009) S. Sakai et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Assessment of the Microbial Ecology of Ruminal Methanogens in Cattle with Different Feed Efficiencies

(2009) M. Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and Strain Specificity of Plant Cell Wall Degrading Enzymes Revealed by the Draft Genome of Ruminococcus flavefaciens FD-1

(2009) Margret E. Berg Miller et al.   PLoS One

Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1T)

(2009) Rüdiger Pukall et al.   Standards in Genomic Sciences

Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea

(2008) Yuchen Liu et al.   Annals of the New York Academy of Sciences

Structure of the Archaeal Community of the Rumen

(2008) P. H. Janssen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Redirecting rumen fermentation to reduce methanogenesis

(2008) T. A. McAllister et al.   Australian journal of experimental agriculture

Enteric fermentation and ruminant eructation: the role (and control?) of methane in the climate change debate

(2008) Andy Thorpe   CLIMATIC CHANGE

Linkage of microbial ecology to phenotype: correlation of rumen microbial ecology to cattle's feed efficiency

(2008) Le Luo Guan et al.   FEMS MICROBIOLOGY LETTERS