V-type nerve agents phosphonylate ubiquitin at biologically relevant lysine residues and induce intramolecular cyclization by an isopeptide bond

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

(2013) Sander Pronk et al.   BIOINFORMATICS

p53 regulation by ubiquitin

(2011) Christopher L. Brooks et al.   FEBS LETTERS

An Automated Force Field Topology Builder (ATB) and Repository: Version 1.0

(2011) Alpeshkumar K. Malde et al.   Journal of Chemical Theory and Computation

Biomarkers of organophosphorus (OP) exposures in humans

(2011) Judit Marsillach et al.   NEUROTOXICOLOGY

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for detection and identification of albumin phosphylation by organophosphorus pesticides and G- and V-type nerve agents

(2010) Harald John et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Review of tyrosine and lysine as new motifs for organophosphate binding to proteins that have no active site serine

(2010) Oksana Lockridge et al.   CHEMICO-BIOLOGICAL INTERACTIONS

Stable adducts of nerve agents sarin, soman and cyclosarin with TRIS, TES and related buffer compounds—Characterization by LC-ESI-MS/MS and NMR and implications for analytical chemistry

(2010) Jürgen Gäb et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Extracellular ubiquitin: immune modulator and endogenous opponent of damage-associated molecular pattern molecules

(2010) Matthias Majetschak   JOURNAL OF LEUKOCYTE BIOLOGY

Characterizing the connectivity of poly-ubiquitin chains by selected reaction monitoring mass spectrometry

(2010) Hamid Mirzaei et al.   Molecular BioSystems

Detection of Adduct on Tyrosine 411 of Albumin in Humans Poisoned by Dichlorvos

(2010) Bin Li et al.   TOXICOLOGICAL SCIENCES

Formation of pyrophosphate-like adducts from nerve agents sarin, soman and cyclosarin in phosphate buffer: Implications for analytical and toxicological investigations

(2010) Jürgen Gäb et al.   TOXICOLOGY LETTERS

Mechanisms of mono- and poly-ubiquitination: Ubiquitination specificity depends on compatibility between the E2 catalytic core and amino acid residues proximal to the lysine

(2010) Martin Sadowski et al.   Cell Division

Mass spectral characterization of organophosphate-labeled lysine in peptides

(2009) Hasmik Grigoryan et al.   ANALYTICAL BIOCHEMISTRY

Biomarkers of organophosphorus nerve agent exposure: comparison of phosphylated butyrylcholinesterase and phosphylated albumin after oxime therapy

(2009) Robert W. Read et al.   ARCHIVES OF TOXICOLOGY

Covalent binding of organophosphorothioates to albumin: a new perspective for OP-pesticide biomonitoring?

(2009) D. Noort et al.   ARCHIVES OF TOXICOLOGY

Quantitative Proteomics Reveals the Function of Unconventional Ubiquitin Chains in Proteasomal Degradation

(2009) Ping Xu et al.   CELL

Nerve Agent Analogues That Produce Authentic Soman, Sarin, Tabun, and Cyclohexyl Methylphosphonate-Modified Human Butyrylcholinesterase

(2009) Cynthia Gilley et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Covalent binding of the organophosphorus agent FP-biotin to tyrosine in eight proteins that have no active site serine

(2009) Hasmik Grigoryan et al.   CHEMICO-BIOLOGICAL INTERACTIONS

Diversity of Polyubiquitin Chains

(2009) Anirban Adhikari et al.   DEVELOPMENTAL CELL

Differential regulation of p53 and p21 by MKRN1 E3 ligase controls cell cycle arrest and apoptosis

(2009) Eun-Woo Lee et al.   EMBO JOURNAL

Mass spectral characterization of organophosphate-labeled, tyrosine-containing peptides: Characteristic mass fragments and a new binding motif for organophosphates

(2009) Lawrence M. Schopfer et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Albumin binding as a potential biomarker of exposure to moderately low levels of organophosphorus pesticides

(2008) Mabruka H. Tarhoni et al.   BIOMARKERS

Polyubiquitin chains: functions, structures, and mechanisms

(2008) W. Li et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Five Tyrosines and Two Serines in Human Albumin Are Labeled by the Organophosphorus Agent FP-Biotin

(2008) Shi-Jian Ding et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Carbofuran poisoning detected by mass spectrometry of butyrylcholinesterase adduct in human serum

(2008) He Li et al.   JOURNAL OF APPLIED TOXICOLOGY

Quantitative Analysis of global Ubiquitination in HeLa Cells by Mass Spectrometry

(2008) David Meierhofer et al.   JOURNAL OF PROTEOME RESEARCH

Binding and Hydrolysis of Soman by Human Serum Albumin

(2007) Bin Li et al.   CHEMICAL RESEARCH IN TOXICOLOGY

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation