4.5 Article

DEVELOPMENT OF MICROSATELLITE MARKERS FOR AULONEMIA ARISTULATA (POACEAE) AND CROSS-AMPLIFICATION IN OTHER BAMBOO SPECIES

期刊

AMERICAN JOURNAL OF BOTANY
卷 98, 期 4, 页码 E90-E92

出版社

WILEY
DOI: 10.3732/ajb.1000511

关键词

Aulonemia; Bambusa; Dendrocalamus; Guadua; SSR

资金

  1. Fundacao de Pesquisa do Estado de Sao Paulo [2009/06817-3, 2010/0138-4]

向作者/读者索取更多资源

Premise of the study: Microsatellite primers were developed for Aulonemia aristulata, an endangered species of economic interest, to further describe its genetic variability and population structure. We also tested cross-amplification in 18 other bamboo species. Methods and Results: Using an enrichment genomic library, 13 microsatellite loci were isolated and characterized in A. aristulata. Seven of these loci were polymorphic. Twelve markers were cross-amplified in at least ten of the tested bamboo species. Conclusions: These markers will be useful for studies on the genetic diversity and structure of A. aristulata, which are important for future conservation, management and breeding programs of this species.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Agronomy

Germination potential and methods for overcoming seed dormancy for domesticated and wild annatto populations after two years of storage

Wellington Ferreira do Nascimento, Fabiana Goncalves Bastos, Gabriel Dequigiovanni, Eliane Gomes Fabri, Maria Imaculada Zucchi, Charles Roland Clement, Elizabeth Ann Veasey

Summary: This study evaluated methods to overcome seed dormancy in annatto trees and compared the germination potential between domesticated and wild populations. The best treatment to overcome dormancy was found to be mechanical scarification with sandpaper.

CIENCIA RURAL (2022)

Article Agronomy

Genetic diversity in accessions of lima bean (Phaseolus lunatus L.) determined from agro-morphological descriptors and SSR markers for use in breeding programs in Brazil

Carolline de Jesus Pires, Marcones Ferreira Costa, Maria Imaculada Zucchi, Regina Lucia Ferreira-Gomes, Jose Baldin Pinheiro, Joao Paulo Gomes Viana, Miklos Maximiliano Bajay, Jose Ribamar Assuncao-Filho, Angela Celis de Almeida Lopes

Summary: The study revealed the high genetic diversity of lima bean landraces in Brazil and suggested that agro-morphological traits and SSR markers are effective in determining genetic diversity. Promising loci for further studies were identified, with accessions UFPI-262 and UFPI-252 showing potential for future breeding programs.

GENETIC RESOURCES AND CROP EVOLUTION (2022)

Article Multidisciplinary Sciences

Selective signatures and high genome-wide diversity in traditional Brazilian manioc (Manihot esculenta Crantz) varieties

Alessandro Alves-Pereira, Maria Imaculada Zucchi, Charles R. Clement, Joao Paulo Gomes Viana, Jose Baldin Pinheiro, Elizabeth Ann Veasey, Anete Pereira de Souza

Summary: This study evaluated the genetic diversity of traditional manioc varieties conserved in a gene bank in Brazil. The researchers found that domestication and cultivation of manioc in different environments led to variations in selective signatures, and different biomes showed high levels of neutral genetic diversity within varieties.

SCIENTIFIC REPORTS (2022)

Article Ecology

Earlier than expected introductions of the Bemisia tabaci B mitotype in Brazil reveal an unprecedented, rapid invasion history

Jorge R. Paredes-Montero, Muriel Rizental, Eliane Dias Quintela, Aluana Goncalves de Abreu, Judith K. Brown

Summary: This study investigated the origin and spread of the Bemisia tabaci B mitotype outbreaks in Brazil in 1991. The results revealed a previously undocumented hybridization event, with the B mitotype likely being a hybrid between a B type parent related to Ethiopian endemism and an unidentified parent from the North Africa-Middle East region. The study also found evidence of two independent introductions of the B mitotype in Brazil in 1989 and 1990, which together led to the complete invasion of Brazil in just 30 generations.

ECOLOGY AND EVOLUTION (2022)

Article Plant Sciences

Maize dispersal patterns associated with different types of endosperm and migration of indigenous groups in lowland South America

Flaviane Malaquias Costa, Natalia Carolina de Almeida Silva, Rafael Vidal, Charles Roland Clement, Fabio de Oliveira Freitas, Alessandro Alves-Pereira, Cesar Daniel Petroli, Maria Imaculada Zucchi, Elizabeth Ann Veasey

Summary: This study identified four genetic groups in the lowlands of South America based on maize dispersal patterns correlated with endosperm types. Spatial analysis of genetic variation suggests different dispersal routes for each endosperm type, potentially associated with expansions of different indigenous groups in the region.

ANNALS OF BOTANY (2022)

Article Agronomy

Genome-wide diversity in native populations of Croton grewioides Baill., a future crop with fungicidal and antioxidant activity, using SNP markers

S. D. S. Oliveira, I. B. Gois, A. F. Blank, M. F. Arrigoni-Blank, M. Zucchi, J. B. Pinheiro, C. E. Batista, A. Alves-Pereira

Summary: This study evaluated the genetic diversity and structure of natural populations of Croton grewioides using SNP markers and selected genotypes for a species collection. The results showed high genetic variation within populations and successful separation of genotypes based on population origin. This is important for the conservation of genetic diversity in Croton grewioides.

GENETIC RESOURCES AND CROP EVOLUTION (2022)

Article Agronomy

SELECTION OF SUPERIOR GENOTYPES OF LIMA BEAN LANDRACES BY MULTIVARIATE APPROACH

Jose Ribamar De Assuncao Filho, Marcones Ferreira Costa, Jose Baldin Pinheiro, Leonardo Castelo Branco Carvalho, Regina Lucia Ferreira-Gomes, Angela Celis De Almeida Lopes

Summary: Knowledge of genetic diversity in plant population is crucial for the success of plant breeding programs. This study characterized and estimated the genetic diversity in landraces of lima bean using morphological traits and multivariate methods. The results showed that certain landraces exhibited high dissimilarity and potential for use in crosses. The study also identified significant phenotypic associations between pod length, pod width, and grain production through principal component analysis.

REVISTA CAATINGA (2022)

Article Agronomy

Genomic population structure of Parkia platycephala Benth. (Leguminosae) from Northeastern Brazil

Joao Gabriel Silva Morais, Marcones Ferreira Costa, Alessandro Alves-Pereira, Maria Imaculada Zucchi, Jose Baldin Pinheiro, Ademir Sergio Ferreira Araujo, Veronica Brito Silva, Regina Lucia Ferreira-Gomes, Angela Celis de Almeida Lopes

Summary: P. platycephala in Northeast Brazil exhibits high genetic diversity, with little divergence between populations. The species has potential for forest restoration and conservation, and the Sete Cidades National Park plays a crucial role in in situ conservation of this species.

GENETIC RESOURCES AND CROP EVOLUTION (2023)

Article Multidisciplinary Sciences

Population genomics of the neotropical palm Copernicia prunifera (Miller) H. E. Moore: Implications for conservation

Marcones Ferreira Costa, Jonathan Andre Morales-Marroquin, Carlos Eduardo de Araujo Batista, Alessandro Alves-Pereira, Fabio de Almeida Vieira, Maria Imaculada Zucchi

Summary: This study evaluated the diversity and genetic structure of 14 populations of Copernicia prunifera using genotyping-by-sequencing. The results showed high genetic diversity and low genetic differentiation between populations. The study highlights the need to conserve this species and its distribution range to preserve its genetic diversity and evolutionary potential.

PLOS ONE (2022)

Article Agronomy

ASSOCIATIVE MAPPING FOR EXOTIC SOYBEAN GERMPLASM GRAIN YIELD IN HIGH TEMPERATURES

Camila Campelo de Sousa, Ubirajara Santana Assuncao, Monica Christina Ferreira, Angela Celis de Almeida Lopes, Regina Lucia Ferreira dos Santos, Jose Baldin Pinheiro

Summary: The objective of this study was to select markers related to soybean yield assessed under high temperatures, using associative mapping. Through evaluation and analysis of 80 soybean PIs and 15 controls, significant associations related to heat tolerance were discovered, which are important for soybean genetic improvement and enhancing heat tolerance.

REVISTA CAATINGA (2022)

Article Forestry

Genetic resilience of Atlantic forest trees to impacts of biome loss and fragmentation

Natalia Santos de Santana, Alesandro Souza Santos, Daniela Bitencourt Borges, Daniele de Souza Franca, Jeiza Botelho Leal Reis, Fernanda Ancelmo de Oliveira, Mariana Araujo Barreto, Ronan Xavier Correa, Maria Imaculada Zucchi, Karina Martins, Sonia Cristina Oliveira Melo, Leandro Lopes Loguercio, Fernanda Amato Gaiotto

Summary: Understanding populational genetic diversity is essential for conservation and species management. This study examines the conservation genetics of economically exploited tree species in the vulnerable Atlantic Forest of Brazil. Genetic parameters of 10 species were compiled, revealing differences in genetic variability and unique alleles. Comparison of data between ontogenic stages suggests that habitat loss has not yet caused significant loss of genetic diversity.

EUROPEAN JOURNAL OF FOREST RESEARCH (2023)

Article Biochemical Research Methods

Assessment of Genetic Diversity in Phaseolus lunatus Landrace Germplasm for Use in Breeding Programs

Leane Fialho de Melo, Solranny Carla Cavalcante Costa e Silva, Gerson do Nascimento Costa, Veronica Brito Silva, Jose Baldin Pinheiro, Maria Imaculada Zucchi, Marcones Ferreira Costa, Regina Lucia Ferreira-Gomes, Angela Celis de Alemida Lopes

Summary: This study evaluated the genetic variation of agromorphological and molecular markers in a collection of lima bean germplasm. The results showed considerable diversity in agronomic traits and a deficiency of heterozygotes at the molecular level. The information generated from this study will play a significant role in future lima bean breeding programs.

PLANT MOLECULAR BIOLOGY REPORTER (2023)

Article Biodiversity Conservation

Floristic composition, pollination and seed-dispersal systems in a target cerrado conservation area

Renan Borgiani, Maria Tereza Grombone-Guaratini, Betania da Cunha Vargas, Amanda Eburneo Martins, Maria Gabriela Gutierrez Camargo, Leonor Patricia Cerdeira Morellato

Summary: The remnant area of cerrado in Itirapina municipality, Sao Paulo, Brazil, holds significant plant species diversity of environmental and ecological importance. After 12 years of inventory, a checklist of 195 plant species from 54 families and 131 genera was compiled.

BIOTA NEOTROPICA (2022)

Article Plant Sciences

A report on the extinction of a population of Coleocephalocereus pluricostatus Buining & Brederoo due to ecological imbalance

Gerardus Olsthoorn, Luciano Delmondes de Alencar, Patricia Azevedo, Maria Imaculada Zucchi

Summary: This article reports on the extinction of a population of Coleocephalocereus pluricostatus and the rapid decline of other populations in eastern Minas Gerais, Brazil. Possible causes include cochineal insects, diseases, and mining operations. The authors offer some hypotheses to explain the decline and suggest monitoring the populations.

BRADLEYA (2022)

暂无数据