Article
Biochemical Research Methods
Emma R. Guiberson, Christopher J. Good, Aaron G. Wexler, Eric P. Skaar, Richard M. Caprioli, Jeffery M. Spraggins
Summary: This study demonstrates a multimodal imaging workflow for mapping intestinal tissue and luminal content. The results highlight the differences in molecular and elemental distributions and abundances between tissue and luminal content.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
(2022)
Article
Biochemical Research Methods
Kavya Sharman, Nathan Heath Patterson, Andy Weiss, Elizabeth K. Neumann, Emma R. Guiberson, Daniel J. Ryan, Danielle B. Gutierrez, Jeffrey M. Spraggins, Raf Van de Plas, Eric P. Skaar, Richard M. Caprioli
Summary: Spatially targeted proteomics analyzes specific cell types and functional regions within tissue. The authors developed a multivariate approach to analyze protein profiles from distinct tissue regions using principal component analysis and k-means clustering. The analysis revealed differential proteomic changes in an infection model, highlighting the dynamic nature of host-pathogen interactions.
JOURNAL OF PROTEOME RESEARCH
(2023)
Article
Biochemistry & Molecular Biology
Sergio Bordel, Diego Martin-Gonzalez, Raul Munoz, Fernando Santos-Beneit
Summary: This study reports the genome of Bacillus altitudinis B12, a bacterium that efficiently degrades PLA and keratin. The genome analysis revealed the presence of genes encoding keratinase and PLA depolymerase, which explain the biodegradation capability of the strain. This bacterium has potential applications in environmentally friendly biotechnology.
MOLECULAR GENETICS AND GENOMICS
(2023)
Article
Microbiology
Fernando Santos-Beneit, Le Min Chen, Sergio Bordel, Raquel Frutos de la Flor, Octavio Garcia-Depraect, Raquel Lebrero, Sara Rodriguez-Vega, Raul Munoz, Rosa Aragao Borner, Tim Borner
Summary: In recent years, microbial enzymes capable of degrading plastics have been discovered. Biocatalytic depolymerization mediated by enzymes has emerged as a more efficient and eco-friendly alternative for plastic treatment and recycling. However, the systematic study of depolymerase enzymes in degrading a range of plastic polymers is still lacking.
Article
Cell Biology
Maria Livia Sassano, Alexander R. R. van Vliet, Ellen Vervoort, Sofie Van Eygen, Chris van den Haute, Benjamin Pavie, Joris Roels, Johannes V. V. Swinnen, Marco Spinazzi, Leen Moens, Kristina Casteels, Isabelle Meyts, Paolo Pinton, Saverio Marchi, Leila Rochin, Francesca Giordano, Blanca Felipe-Abrio, Patrizia Agostinis
Summary: ER-mitochondria appositions play a critical role in the transfer of ions and phospholipids between these organelles and impact mitochondrial bioenergetics. However, the molecular mechanisms involved in this process are not well understood. This study reveals that PERK acts as an adaptor to recruit the lipid transfer protein E-Syt1 at ER-mitochondria contact sites, enabling lipid transport and maintaining mitochondrial homeostasis. These findings provide insights into the molecular components and functions of the lipid trafficking machinery at ER-mitochondria contact sites.
JOURNAL OF CELL BIOLOGY
(2023)
Article
Biochemical Research Methods
Allison B. B. Esselman, Nathan Heath Patterson, Lukasz G. G. Migas, Martin Dufresne, Katerina V. V. Djambazova, Madeline E. E. Colley, Raf van de Plas, Jeffrey M. M. Spraggins
Summary: The glomerulus is a multicellular functional tissue unit responsible for blood filtration. High spatial resolution molecular imaging methods are needed to understand normal aging and disease in kidneys. In this study, a workflow using microscopy-driven selected sampling was demonstrated to enable high-resolution imaging of glomeruli within human kidney tissues. Automated segmentation and machine learning methods were used to analyze the molecular profiles of glomerular subregions and differentiate between healthy and diseased glomeruli. This automated microscopy-driven acquisition method allows for rapid assessment of cellular resolution whole slide images and identification of tissue features associated with normal aging and disease.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
(2023)
Article
Biochemical Research Methods
Kavya Sharman, Nathan Heath Patterson, Lukasz G. Migas, Elizabeth K. Neumann, Jamie Allen, Katherine N. Gibson-Corley, Jeffrey M. Spraggins, Raf Van de Plas, Eric P. Skaar, Richard M. Caprioli
Summary: Imaging mass spectrometry (IMS) is a powerful technique to visualize molecular distributions in tissue. Traditional heatmaps used to overlay IMS data onto microscopy images obscure subtle differences and gradients. In this study, we developed a contour mapping approach that combines IMS data with stained microscopy to enhance visualization. By applying this approach to a case study of Staphylococcus aureus-infected murine kidney, we were able to visualize lipid distributions and molecular profiles more effectively compared to traditional heatmaps. Our contour mapping workflow provides a better interpretation of IMS-microscopy multimodal molecular imaging data sets beyond what histological staining alone can offer.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
(2023)
Article
Biochemistry & Molecular Biology
Lucas Coppens, Tanya Tschirhart, Dagmar H. Leary, Sophie M. Colston, Jaimee R. Compton, William Judson Hervey, Karl L. Dana, Gary J. Vora, Sergio Bordel, Rodrigo Ledesma-Amaro
Summary: This study presents the first genome-scale metabolic model (GSMM) of V. natriegens, which was validated and compared with empirical data. The model was used for a metabolic comparison between V. natriegens and Escherichia coli, leading to the discovery of the model architecture of V. natriegens' respiratory and ATP-generating system as well as a sodium-dependent oxaloacetate decarboxylase pump. The proteomics data also provided insights into the halophilic adaptations of V. natriegens. Additionally, a Resource Balance Analysis model was created using the GSMM to study carbon resource allocation.
MOLECULAR SYSTEMS BIOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Monika Pankeviciute-Bukauskiene, Valeryia Mikalayeva, Vaidotas Zvikas, V. Arvydas Skeberdis, Sergio Bordel
Summary: A pipeline for metabolomics was used to test malignant and non-malignant breast cancer cell lines, and an integrated analysis of metabolomics and transcriptomics was carried out. Metabolomics revealed changes in metabolite concentration associated with malignancy, including depleted metabolites and increased serine and pyroglutamic acid. Transcriptomics analysis showed lower expression of the AHCY gene and overexpression of PHGDH, PSPH, and CHAC1 genes in cancer cell lines.
Article
Multidisciplinary Sciences
Zoe P. Van Acker, Anika Perdok, Ruben Hellemans, Katherine North, Inge Vorsters, Cedric Cappel, Jonas Dehairs, Johannes V. Swinnen, Ragna Sannerud, Marine Bretou, Markus Damme, Wim Annaert
Summary: Phospholipase D3 polymorphisms are associated with late-onset Alzheimer's disease (LOAD), but the underlying mechanisms are unclear. This study reveals that Phospholipase D3 processes mitochondrial DNA in lysosomes, leading to lysosomal dysfunction and abnormal degradation of amyloid precursor protein. The accumulation of mitochondrial DNA in lysosomes activates cGAS-STING signaling, resulting in dysregulation of autophagy and cholesterol metabolism, which contributes to the pathogenesis of LOAD.
NATURE COMMUNICATIONS
(2023)
Article
Microbiology
Diego Martin-Gonzalez, Sergio Bordel, Selvin Solis, Jorge Gutierrez-Merino, Fernando Santos-Beneit
Summary: Two efficient feather-degrading bacteria, Bacillus sonorensis and Bacillus licheniformis, were isolated from honeybee samples and showed the ability to grow on chicken feathers as the sole carbon and nitrogen sources. B. licheniformis CG1 strain exhibited high keratinase activity and broad pH stability, making it advantageous for various industrial applications. Gene clusters associated with the synthesis of antimicrobial compounds were identified in most Bacillus isolates, with B. licheniformis CG1 containing sequences similar to lichenysin and lichenicidin, which have shown antimicrobial activity against different bacteria. This study highlights the potential of B. licheniformis CG1 for industrial applications such as animal nutrition, leather processing, detergent formulation, and feather degradation.
Article
Microbiology
Diego Martin-Gonzalez, Sergio Bordel, Fernando Santos-Beneit
Summary: In this study, efficient chicken feather-degrading Streptomyces bacteria were isolated from honeybee samples. Co-cultivation of these bacteria showed an increase in antibiotic production and metabolic wealth. The production of specialized metabolites was enhanced in co-culture conditions, leading to improved antimicrobial activity against Staphylococcus aureus.
Article
Cell Biology
Sanjay Jain, Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson, Nils Gehlenborg, Fiona Ginty, Joana P. Goncalves, James S. Hagood, John W. Hickey, Neil L. Kelleher, Louise C. Laurent, Shin Lin, Yiing Lin, Huiping Liu, Alexandra Naba, Ernesto S. Nakayasu, Wei-Jun Qian, Andrea Radtke, Paul Robson, Brent R. Stockwell, Raf Van de Plas, Ioannis S. Vlachos, Mowei Zhou, Katy Boerner, Michael P. Snyder, Kyung Jin Ahn, Jamie Allen, David M. Anderson, Christopher R. Anderton, Christine Curcio, Alessia Angelin, Constadina Arvanitis, Lyla Atta, Demi Awosika-Olumo, Amir Bahmani, Huajun Bai, Karol Balderrama, Leandro Balzano, Gautam Bandyopadhyay, Shovik Bandyopadhyay, Ziv Bar-Joseph, Kurt Barnhart, Daria Barwinska, Michael Becich, Laren Becker, Winston Becker, Kenneth Bedi, Sean Bendall, Kathy Benninger, David Betancur, Keith Bettinger, Sunteasja Billings, Philip Blood, Daniel Bolin, Samuel Border, Marc Bosse, Lisa Bramer, Maya Brewer, Maigan Brusko, Andreas Bueckle, Karl Burke, Kristin Burnum-Johnson, Eugene Butcher, Elizabeth Butterworth, Long Cai, Riccardo Calandrelli, Michael Caldwell, Martha Campbell-Thompson, Dongfeng Cao, Ivan Cao-Berg, Richard Caprioli, Chiara Caraccio, Anita Caron, Megan Carroll, Chrystal Chadwick, Angela Chen, Derek Chen, Fei Chen, Haoran Chen, Jing Chen, Li Chen, Lu Chen, Kenneth Chiacchia, Sanghee Cho, Peter Chou, Lisa Choy, Cecilia Cisar, Geremy Clair, Laura Clarke, Kelly A. Clouthier, Madeline E. Colley, Kristin Conlon, John Conroy, Kevin Contrepois, Anthony Corbett, Alex Corwin, Daniel Cotter, Elise Courtois, Aaron Cruz, Christopher Csonka, Kimberley Czupil, Vicky Daiya, Kali Dale, Shakeel Ahamed Davanagere, Monica Dayao, Mark P. de Caestecker, Aubrianna Decker, Stephen Deems, David Degnan, Tushar Desai, Vikrant Deshpande, Gail Deutsch, Michelle Devlin, Dinh Diep, Carla Dodd, Sean Donahue, Weixiu Dong, Rafael dos Santos Peixoto, Michael Duffy, Martin Dufresne, Thu Elizabeth Duong, Jennifer Dutra, Michael T. Eadon, Tarek M. El-Achkar, Archibald Enninful, Gokcen Eraslan, Diane Eshelman, Almudena Espin-Perez, Edward D. Esplin, Allison Esselman, Louis D. Falo, Louis Falo, Jean Fan, Rong Fan, Melissa A. Farrow, Negin Farzad, Patricia Favaro, Jamie Fermin, Ferda Filiz, Shane Filus, Kathleen Fisch, Eyal Fisher, Stephen Fisher, Katelyn Flowers, William F. Flynn, Agnes B. Fogo, Dongtao (Ann) Fu, James Fulcher, Anthony Fung, Derek Furst, Michael Gallant, Fu Gao, Yu Gao, Kyle Gaulton, Joseph P. Gaut, James Gee, Reetika R. Ghag, Shila Ghazanfar, Soumya Ghose, Debora Gisch, Ilan Gold, Aashay Gondalia, Brittney Gorman, William Greenleaf, Noah Greenwald, Brian Gregory, Rong Guo, Rajat Gupta, Hunter Hakimian, Jeff Haltom, Marc Halushka, Kyu Sang Han, Casey Hanson, Pehr Harbury, Josef Hardi, Linda Harlan, Raymond C. Harris, Austin Hartman, Elyas Heidari, Jesse Helfer, David Helminiak, Martin Hemberg, Nathaniel Henning, Bruce W. Herr, Jonhan Ho, Jeanne Holden-Wiltse, Seung-Hyun Hong, Young-Kwon Hong, Brendan Honick, Greg Hood, Po Hu, Qiwen Hu, Molly Huang, Heidie Huyck, Tamjid Imtiaz, Olof Gerdur Isberg, Maxim Itkin, Dana Jackson, Marni Jacobs, Yashvardhan Jain, David Jewell, Lihua Jiang, Zhenghui G. Jiang, Sarah Johnston, Pujan Joshi, Yingnan Ju, Audra Judd, Adam Kagel, Ari Kahn, Nikolaos Kalavros, Kian Kalhor, Dimitra Karagkouni, Thomas Karathanos, Arivarasan Karunamurthy, Suhas Katari, Heather Kates, Madhurima Kaushal, Nicholas Keener, Mark Keller, Mariah Kenney, Colin Kern, Peter Kharchenko, Junhyong Kim, Carl Kingsford, Jessica Kirwan, Vladimir Kiselev, Jocelyn Kishi, Reta Birhanu Kitata, Amanda Knoten, Charles Kollar, Praveen Krishnamoorthy, Angela R. S. Kruse, Kuang Da, Anshul Kundaje, Eric Kutschera, Yumi Kwon, Blue B. Lake, Samuel Lancaster, Jonah Langlieb, Roy Lardenoije, Monica Laronda, Julia Laskin, Ken Lau, Hayan Lee, Maria Lee, Mejeong Lee, Yulia Levites Strekalova, Dongshunyi Li, Jennifer Li, Jilong Li, Xiangtang Li, Zhi Li, Yen-Chen Liao, Tiffany Liaw, Pei Lin, Yulieh Lin, Scott Lindsay, Chunjie Liu, Yang Liu, Yuan Liu, Marie Lott, Martin Lotz, Lisa Lowery, Peiran Lu, Xinyue Lu, Nicholas Lucarelli, Xiaokang Lun, Zhifei Luo, Jian Ma, Evan Macosko, Mayank Mahajan, Libby Maier, Danika Makowski, Morad Malek, David Manthey, Trevor Manz, Kenneth Margulies, John Marioni, Matthew Martindale, Cayla Mason, Clayton Mathews, Peter Maye, Chuck McCallum, Elizabeth McDonough, Liz McDonough, Hannah Mcdowell, Morgan Meads, Miguel Medina-Serpas, Ricardo Melo Ferreira, Jeffrey Messinger, Kay Metis, Lukasz G. Migas, Brendan Miller, Sayat Mimar, Brittany Minor, Ravi Misra, Alsu Missarova, Christopher Mistretta, Roger Moens, Eric Moerth, Jeffrey Moffitt, Gesmira Molla, Matthew Monroe, Emma Monte, Mike Morgan, Daniele Muraro, Bob (Robert) Murphy, Evan Murray, Mark A. Musen, Ahmed Naglah, Chanond Nasamran, Taruna Neelakantan, Stephanie Nevins, Hieu Nguyen, Nam Nguyen, Tram Nguyen, Tri Nguyen, Deb Nigra, Michel Nofal, Garry Nolan, Gerald Nwanne, Martin O'Connor, Kenichi Okuda, Merissa Olmer, Kathleen O'Neill, Nancy Otaluka, Minxing Pang, Mana Parast, Ljiljana Pasa-Tolic, Benedict Paten, Nathan Heath Patterson, Ting Peng, Gesina Phillips, Mina Pichavant, Paul Piehowski, Hannah Pilner, Ellie Pingry, Yered Pita-Juarez, Sylvia Plevritis, Athanasios Ploumakis, Alison Pouch, Gloria Pryhuber, Juan Puerto, Danial Qaurooni, Ling Qin, Ellen M. Quardokus, Presha Rajbhandari, Rebecca Rakow-Penner, Ramalakshmi Ramasamy, David Read, Elizabeth G. Record, David Reeves, Allyson Ricarte, Ana Rodriguez-Soto, Alexander Ropelewski, Jean Rosario, Morla-Adames Roselkis, David Rowe, Tarun Kanti Roy, Matt Ruffalo, Nancy Ruschman, Angela Sabo, Nina Sachdev, Sinem Saka, Diane Salamon, Pinaki Sarder, Hiroshi Sasaki, Rahul Satija, Diane Saunders, Riley Sawka, Kevin Schey, Heidi Schlehlein, David Scholten, Sarah Schultz, Lauren Schwartz, Melissa Schwenk, Robin Scibek, Ayellet Segre, Matthew Serrata, Walter Shands, Xiaotao Shen, Jay Shendure, Holly Shephard, Lingyan Shi, Tujin Shi, Dong-Guk Shin, Bill Shirey, Max Sibilla, Michal Silber, Jonathan Silverstein, Derek Simmel, Alan Simmons, Dhruv Singhal, Santhosh Sivajothi, Thomas Smits, Francesca Soncin, Qi Song, Valentina Stanley, Tim Stuart, Hanquan Su, Pei Su, Xin Sun, Christine Surrette, Hannah Swahn, Kai Tan, Sarah Teichmann, Abhiroop Tejomay, George Tellides, Kathleen Thomas, Tracey Thomas, Marissa Thompson, Hua Tian, Leonoor Tideman, Cole Trapnell, Albert G. Tsai, Chia-Feng Tsai, Leo Tsai, Elizabeth Tsui, Tina Tsui, Jason Tung, Morgan Turner, Jackie Uranic, Eeshit Dhaval Vaishnav, Sricharan Reddy Varra, Vasyl Vaskivskyi, Dusan Velickovic, Marija Velickovic, Jamie Verheyden, Jessica Waldrip, Douglas Wallace, Xueyi Wan, Allen Wang, Fusheng Wang, Meng Wang, Shuoshuo Wang, Xuefei Wang, Clive Wasserfall, Leonard Wayne, James Webber, Griffin M. Weber, Bei Wei, Jian-Jun Wei, Annika Weimer, Joel Welling, Xingzhao Wen, Zishen Wen, MacKenzie Williams, Seth Winfree, Nicholas Winograd, Abashai Woodard, Devin Wright, Fan Wu, Pei-Hsun Wu, Qiuyang Wu, Xiaodong Wu, Yi Xing, Tiangyang Xu, Manxi Yang, Mingyu Yang, Joseph Yap, Dong Hye Ye, Peng Yin, Zhou Yuan, Chi (Jina) Yun, Ali Zahraei, Kevin Zemaitis, Bo Zhang, Caibin Zhang, Chenyu Zhang, Chi Zhang, Kun Zhang, Shiping Zhang, Ted Zhang, Yida Zhang, Bingqing Zhao, Wenxin Zhao, Jia Wen Zheng, Sheng Zhong, Bokai Zhu, Chenchen Zhu, Diming Zhu, Quan Zhu, Ying Zhu
Summary: The Human Biomolecular Atlas Program (HuBMAP) aims to create a spatial atlas of the healthy human body at single-cell resolution using advanced technologies and disseminating resources to the community. This Perspective introduces the production phase of HuBMAP, which involves generating spatial maps of functional tissue units across organs from diverse populations and creating tools and infrastructure to advance biomedical research.
NATURE CELL BIOLOGY
(2023)
Review
Chemistry, Analytical
Katerina V. Djambazova, Jacqueline M. Van Ardenne, Jeffrey M. Spraggins
Summary: Imaging mass spectrometry allows for the untargeted mapping of biomolecules directly from tissue sections, with widespread clinical applicability in disease diagnosis and classification. This review summarizes the two most widely employed IMS technologies and their advancements in biomedical applications.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY
(2023)
Article
Cell Biology
Sanjay Jain, Liming Pei, Jeffrey M. Spraggins, Michael Angelo, James P. Carson, Nils Gehlenborg, Fiona Ginty, Joana P. Goncalves, James S. Hagood, John W. Hickey, Neil L. Kelleher, Louise C. Laurent, Shin Lin, Yiing Lin, Huiping Liu, Alexandra Naba, Ernesto S. Nakayasu, Wei-Jun Qian, Andrea Radtke, Paul Robson, Brent R. Stockwell, Raf Van de Plas, Ioannis S. Vlachos, Mowei Zhou, Katy Boerner, Michael P. Snyder, Kyung Jin Ahn, Jamie Allen, David M. Anderson, Christopher R. Anderton, Christine Curcio, Alessia Angelin, Constadina Arvanitis, Lyla Atta, Demi Awosika-Olumo, Amir Bahmani, Huajun Bai, Karol Balderrama, Leandro Balzano, Gautam Bandyopadhyay, Shovik Bandyopadhyay, Ziv Bar-Joseph, Kurt Barnhart, Daria Barwinska, Michael Becich, Laren Becker, Winston Becker, Kenneth Bedi, Sean Bendall, Kathy Benninger, David Betancur, Keith Bettinger, Sunteasja Billings, Philip Blood, Daniel Bolin, Samuel Border, Marc Bosse, Lisa Bramer, Maya Brewer, Maigan Brusko, Andreas Bueckle, Karl Burke, Kristin Burnum-Johnson, Eugene Butcher, Elizabeth Butterworth, Long Cai, Riccardo Calandrelli, Michael Caldwell, Martha Campbell-Thompson, Dongfeng Cao, Ivan Cao-Berg, Richard Caprioli, Chiara Caraccio, Anita Caron, Megan Carroll, Chrystal Chadwick, Angela Chen, Derek Chen, Fei Chen, Haoran Chen, Jing Chen, Li Chen, Lu Chen, Kenneth Chiacchia, Sanghee Cho, Peter Chou, Lisa Choy, Cecilia Cisar, Geremy Clair, Laura Clarke, Kelly A. Clouthier, Madeline E. Colley, Kristin Conlon, John Conroy, Kevin Contrepois, Anthony Corbett, Alex Corwin, Daniel Cotter, Elise Courtois, Aaron Cruz, Christopher Csonka, Kimberley Czupil, Vicky Daiya, Kali Dale, Shakeel Ahamed Davanagere, Monica Dayao, Mark P. de Caestecker, Aubrianna Decker, Stephen Deems, David Degnan, Tushar Desai, Vikrant Deshpande, Gail Deutsch, Michelle Devlin, Dinh Diep, Carla Dodd, Sean Donahue, Weixiu Dong, Rafael dos Santos Peixoto, Michael Duffy, Martin Dufresne, Thu Elizabeth Duong, Jennifer Dutra, Michael T. Eadon, Tarek M. El-Achkar, Archibald Enninful, Gokcen Eraslan, Diane Eshelman, Almudena Espin-Perez, Edward D. Esplin, Allison Esselman, Louis D. Falo, Louis Falo, Jean Fan, Rong Fan, Melissa A. Farrow, Negin Farzad, Patricia Favaro, Jamie Fermin, Ferda Filiz, Shane Filus, Kathleen Fisch, Eyal Fisher, Stephen Fisher, Katelyn Flowers, William F. Flynn, Agnes B. Fogo, Dongtao (Ann) Fu, James Fulcher, Anthony Fung, Derek Furst, Michael Gallant, Fu Gao, Yu Gao, Kyle Gaulton, Joseph P. Gaut, James Gee, Reetika R. Ghag, Shila Ghazanfar, Soumya Ghose, Debora Gisch, Ilan Gold, Aashay Gondalia, Brittney Gorman, William Greenleaf, Noah Greenwald, Brian Gregory, Rong Guo, Rajat Gupta, Hunter Hakimian, Jeff Haltom, Marc Halushka, Kyu Sang Han, Casey Hanson, Pehr Harbury, Josef Hardi, Linda Harlan, Raymond C. Harris, Austin Hartman, Elyas Heidari, Jesse Helfer, David Helminiak, Martin Hemberg, Nathaniel Henning, Bruce W. Herr, Jonhan Ho, Jeanne Holden-Wiltse, Seung-Hyun Hong, Young-Kwon Hong, Brendan Honick, Greg Hood, Po Hu, Qiwen Hu, Molly Huang, Heidie Huyck, Tamjid Imtiaz, Olof Gerdur Isberg, Maxim Itkin, Dana Jackson, Marni Jacobs, Yashvardhan Jain, David Jewell, Lihua Jiang, Zhenghui G. Jiang, Sarah Johnston, Pujan Joshi, Yingnan Ju, Audra Judd, Adam Kagel, Ari Kahn, Nikolaos Kalavros, Kian Kalhor, Dimitra Karagkouni, Thomas Karathanos, Arivarasan Karunamurthy, Suhas Katari, Heather Kates, Madhurima Kaushal, Nicholas Keener, Mark Keller, Mariah Kenney, Colin Kern, Peter Kharchenko, Junhyong Kim, Carl Kingsford, Jessica Kirwan, Vladimir Kiselev, Jocelyn Kishi, Reta Birhanu Kitata, Amanda Knoten, Charles Kollar, Praveen Krishnamoorthy, Angela R. S. Kruse, Kuang Da, Anshul Kundaje, Eric Kutschera, Yumi Kwon, Blue B. Lake, Samuel Lancaster, Jonah Langlieb, Roy Lardenoije, Monica Laronda, Julia Laskin, Ken Lau, Hayan Lee, Maria Lee, Mejeong Lee, Yulia Levites Strekalova, Dongshunyi Li, Jennifer Li, Jilong Li, Xiangtang Li, Zhi Li, Yen-Chen Liao, Tiffany Liaw, Pei Lin, Yulieh Lin, Scott Lindsay, Chunjie Liu, Yang Liu, Yuan Liu, Marie Lott, Martin Lotz, Lisa Lowery, Peiran Lu, Xinyue Lu, Nicholas Lucarelli, Xiaokang Lun, Zhifei Luo, Jian Ma, Evan Macosko, Mayank Mahajan, Libby Maier, Danika Makowski, Morad Malek, David Manthey, Trevor Manz, Kenneth Margulies, John Marioni, Matthew Martindale, Cayla Mason, Clayton Mathews, Peter Maye, Chuck McCallum, Elizabeth McDonough, Liz McDonough, Hannah Mcdowell, Morgan Meads, Miguel Medina-Serpas, Ricardo Melo Ferreira, Jeffrey Messinger, Kay Metis, Lukasz G. Migas, Brendan Miller, Sayat Mimar, Brittany Minor, Ravi Misra, Alsu Missarova, Christopher Mistretta, Roger Moens, Eric Moerth, Jeffrey Moffitt, Gesmira Molla, Matthew Monroe, Emma Monte, Mike Morgan, Daniele Muraro, Bob (Robert) Murphy, Evan Murray, Mark A. Musen, Ahmed Naglah, Chanond Nasamran, Taruna Neelakantan, Stephanie Nevins, Hieu Nguyen, Nam Nguyen, Tram Nguyen, Tri Nguyen, Deb Nigra, Michel Nofal, Garry Nolan, Gerald Nwanne, Martin O'Connor, Kenichi Okuda, Merissa Olmer, Kathleen O'Neill, Nancy Otaluka, Minxing Pang, Mana Parast, Ljiljana Pasa-Tolic, Benedict Paten, Nathan Heath Patterson, Ting Peng, Gesina Phillips, Mina Pichavant, Paul Piehowski, Hannah Pilner, Ellie Pingry, Yered Pita-Juarez, Sylvia Plevritis, Athanasios Ploumakis, Alison Pouch, Gloria Pryhuber, Juan Puerto, Danial Qaurooni, Ling Qin, Ellen M. Quardokus, Presha Rajbhandari, Rebecca Rakow-Penner, Ramalakshmi Ramasamy, David Read, Elizabeth G. Record, David Reeves, Allyson Ricarte, Ana Rodriguez-Soto, Alexander Ropelewski, Jean Rosario, Morla-Adames Roselkis, David Rowe, Tarun Kanti Roy, Matt Ruffalo, Nancy Ruschman, Angela Sabo, Nina Sachdev, Sinem Saka, Diane Salamon, Pinaki Sarder, Hiroshi Sasaki, Rahul Satija, Diane Saunders, Riley Sawka, Kevin Schey, Heidi Schlehlein, David Scholten, Sarah Schultz, Lauren Schwartz, Melissa Schwenk, Robin Scibek, Ayellet Segre, Matthew Serrata, Walter Shands, Xiaotao Shen, Jay Shendure, Holly Shephard, Lingyan Shi, Tujin Shi, Dong-Guk Shin, Bill Shirey, Max Sibilla, Michal Silber, Jonathan Silverstein, Derek Simmel, Alan Simmons, Dhruv Singhal, Santhosh Sivajothi, Thomas Smits, Francesca Soncin, Qi Song, Valentina Stanley, Tim Stuart, Hanquan Su, Pei Su, Xin Sun, Christine Surrette, Hannah Swahn, Kai Tan, Sarah Teichmann, Abhiroop Tejomay, George Tellides, Kathleen Thomas, Tracey Thomas, Marissa Thompson, Hua Tian, Leonoor Tideman, Cole Trapnell, Albert G. Tsai, Chia-Feng Tsai, Leo Tsai, Elizabeth Tsui, Tina Tsui, Jason Tung, Morgan Turner, Jackie Uranic, Eeshit Dhaval Vaishnav, Sricharan Reddy Varra, Vasyl Vaskivskyi, Dusan Velickovic, Marija Velickovic, Jamie Verheyden, Jessica Waldrip, Douglas Wallace, Xueyi Wan, Allen Wang, Fusheng Wang, Meng Wang, Shuoshuo Wang, Xuefei Wang, Clive Wasserfall, Leonard Wayne, James Webber, Griffin M. Weber, Bei Wei, Jian-Jun Wei, Annika Weimer, Joel Welling, Xingzhao Wen, Zishen Wen, MacKenzie Williams, Seth Winfree, Nicholas Winograd, Abashai Woodard, Devin Wright, Fan Wu, Pei-Hsun Wu, Qiuyang Wu, Xiaodong Wu, Yi Xing, Tiangyang Xu, Manxi Yang, Mingyu Yang, Joseph Yap, Dong Hye Ye, Peng Yin, Zhou Yuan, Chi (Jina) Yun, Ali Zahraei, Kevin Zemaitis, Bo Zhang, Caibin Zhang, Chenyu Zhang, Chi Zhang, Kun Zhang, Shiping Zhang, Ted Zhang, Yida Zhang, Bingqing Zhao, Wenxin Zhao, Jia Wen Zheng, Sheng Zhong, Bokai Zhu, Chenchen Zhu, Diming Zhu, Quan Zhu, Ying Zhu
Summary: The Human BioMolecular Atlas Program (HuBMAP) presents its production phase: the generation of spatial maps of functional tissue units across organs from diverse populations and the creation of tools and infrastructure to advance biomedical research.
NATURE CELL BIOLOGY
(2023)