Construction of ethylene regulatory network based on the phytohormones related gene transcriptome profiling and prediction of transcription factor activities in soybean

Effects of abiotic stress on plants: a systems biology perspective

(2012) Grant R Cramer et al.   BMC PLANT BIOLOGY

Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene

(2012) Julien Pirrello et al.   BMC PLANT BIOLOGY

Characterization of a spliced variant of human IRF-3 promoter and its regulation by the transcription factor Sp1

(2012) Wei Ren et al.   MOLECULAR BIOLOGY REPORTS

The Ethylene Signal Mediates Induction ofGmATG8iin Soybean Plants under Starvation Stress

(2011) Munehiro OKUDA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Ethylene-dependent/ethylene-independent ABA regulation of tomato plants colonized by arbuscular mycorrhiza fungi

(2011) José Ángel Martín-Rodríguez et al.   NEW PHYTOLOGIST

Brassinosteroid Signal Transduction: From Receptor Kinase Activation to Transcriptional Networks Regulating Plant Development

(2011) Steven D. Clouse   PLANT CELL

Genomic Analysis of Circadian Clock-, Light-, and Growth-Correlated Genes Reveals PHYTOCHROME-INTERACTING FACTOR5 as a Modulator of Auxin Signaling in Arabidopsis

(2011) K. Nozue et al.   PLANT PHYSIOLOGY

A Soybean Dual-Specificity Kinase, GmSARK, and Its Arabidopsis Homolog, AtSARK, Regulate Leaf Senescence through Synergistic Actions of Auxin and Ethylene

(2011) F. Xu et al.   PLANT PHYSIOLOGY

Nitric oxide improves aluminum tolerance by regulating hormonal equilibrium in the root apices of rye and wheat

(2011) Hu-Yi He et al.   PLANT SCIENCE

Effects of ethylene degreening on the transcriptome of mandarin flesh

(2011) Lina Mayuoni et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

Empirical bayes analysis of sequencing-based transcriptional profiling without replicates

(2010) Zhijin Wu et al.   BMC BIOINFORMATICS

Effect of drought and ABA on growth, photosynthesis and antioxidant system of Cotinus coggygria seedlings under two different light conditions

(2010) Yan Li et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Ethylene production under high temperature stress causes premature leaf senescence in soybean

(2010) Maduraimuthu Djanaguiraman et al.   FUNCTIONAL PLANT BIOLOGY

Intersections between immune responses and morphological regulation in plants

(2010) N. Uchida et al.   JOURNAL OF EXPERIMENTAL BOTANY

Effects of Promoters and Inhibitors of Ethylene and ABA on Flower Senescence of Hibiscus rosa-sinensis L.

(2010) Alice Trivellini et al.   JOURNAL OF PLANT GROWTH REGULATION

Overexpression of AtDOF4.7, an Arabidopsis DOF Family Transcription Factor, Induces Floral Organ Abscission Deficiency in Arabidopsis

(2010) P.-C. Wei et al.   PLANT PHYSIOLOGY

Microarray Analysis of the Abscission-Related Transcriptome in the Tomato Flower Abscission Zone in Response to Auxin Depletion

(2010) S. Meir et al.   PLANT PHYSIOLOGY

Transcriptome Analysis of the Brown Planthopper Nilaparvata lugens

(2010) Jian Xue et al.   PLoS One

Mechanism of Auxin-Regulated Gene Expression in Plants

(2009) Elisabeth J. Chapman et al.   Annual Review of Genetics

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

1-Aminocyclopropane-1-carboxylic acid (ACC) concentration and ACC synthase expression in soybean roots, root tips, and soybean cyst nematode (Heterodera glycines)-infected roots

(2009) Mark L. Tucker et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of the CBF2 transcriptional activator in Arabidopsis delays leaf senescence and extends plant longevity

(2009) Michal Sharabi-Schwager et al.   JOURNAL OF EXPERIMENTAL BOTANY

Recent advances and emerging trends in plant hormone signalling

(2009) Aaron Santner et al.   NATURE

Next-generation DNA sequencing techniques

(2009) Wilhelm J. Ansorge   New Biotechnology

Cytochrome P450 Monooxygenases as Reporters for Circadian-Regulated Pathways

(2009) Y. Pan et al.   PLANT PHYSIOLOGY

Preparation of ethylene gas and comparison of ethylene responses induced by ethylene, ACC, and ethephon

(2009) Wei Zhang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Ethylene regulates ascorbic acid content during dark-induced leaf senescence

(2009) Gustavo Gergoff et al.   PLANT SCIENCE

Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines

(2008) Xiaomeng Ge et al.   BMC PLANT BIOLOGY

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

(2008) Peter A. C. 't Hoen et al.   NUCLEIC ACIDS RESEARCH

MYBL2 is a new regulator of flavonoid biosynthesis inArabidopsis thaliana

(2008) Christian Dubos et al.   PLANT JOURNAL

Interactions between circadian and hormonal signalling in plants

(2008) Fiona C. Robertson et al.   PLANT MOLECULAR BIOLOGY

Cross-regulatory mechanisms in hormone signaling

(2008) Kavitha T. Kuppusamy et al.   PLANT MOLECULAR BIOLOGY