A Census of Tandemly Repeated Polymorphic Loci in Genic Regions Through the Comparative Integration of Human Genome Assemblies

Genome-wide profiling of heritable and de novo STR variations

(2017) Thomas Willems et al.   NATURE METHODS

Interrogating the “unsequenceable” genomic trinucleotide repeat disorders by long-read sequencing

(2017) Qian Liu et al.   Genome Medicine

Characterization of MinION nanopore data for resequencing analyses

(2016) Alberto Magi et al.   BRIEFINGS IN BIOINFORMATICS

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Accurate typing of short tandem repeats from genome-wide sequencing data and its applications

(2015) Arkarachai Fungtammasan et al.   GENOME RESEARCH

MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals

(2015) Keisha D. Carlson et al.   GENOME RESEARCH

SMRT Sequencing of Long Tandem Nucleotide Repeats in SCA10 Reveals Unique Insight of Repeat Expansion Structure

(2015) Karen N. McFarland et al.   PLoS One

PacBio Sequencing and Its Applications

(2015) Anthony Rhoads et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Sequencing technologies and tools for short tandem repeat variation detection

(2014) M. D. Cao et al.   BRIEFINGS IN BIOINFORMATICS

The landscape of human STR variation

(2014) Thomas Willems et al.   GENOME RESEARCH

VNTRseek—a computational tool to detect tandem repeat variants in high-throughput sequencing data

(2014) Yevgeniy Gelfand et al.   NUCLEIC ACIDS RESEARCH

Large-scale analysis of tandem repeat variability in the human genome

(2014) Jorge Duitama et al.   NUCLEIC ACIDS RESEARCH

Challenges in analysis and interpretation of microsatellite data for population genetic studies

(2014) Alexander I. Putman et al.   Ecology and Evolution

ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats

(2013) Hongseok Tae et al.   BIOINFORMATICS

The functional VNTR MNS16A of the TERT gene is associated with human longevity in a population of Central Italy

(2013) Fabio Concetti et al.   EXPERIMENTAL GERONTOLOGY

My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing

(2013) Christophe Van Neste et al.   Forensic Science International-Genetics

The VNTR in complex disorders: The forgotten polymorphisms? A functional way forward?

(2013) K.J. Brookes   GENOMICS

Population Structure in a Comprehensive Genomic Data Set on Human Microsatellite Variation

(2013) Trevor J. Pemberton et al.   G3-Genes Genomes Genetics

lobSTR: A short tandem repeat profiler for personal genomes

(2012) Melissa Gymrek et al.   GENOME RESEARCH

Sequencing the unsequenceable: Expanded CGG-repeat alleles of the fragile X gene

(2012) E. W. Loomis et al.   GENOME RESEARCH

Accurate human microsatellite genotypes from high-throughput resequencing data using informed error profiles

(2012) Gareth Highnam et al.   NUCLEIC ACIDS RESEARCH

Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions

(2011) D. He et al.   BIOINFORMATICS

TRStalker: an efficient heuristic for finding fuzzy tandem repeats

(2010) Marco Pellegrini et al.   BIOINFORMATICS

SERPINE1 intron polymorphisms affecting gene expression are associated with diffuse-type gastric cancer susceptibility

(2010) Hyoungseok Ju et al.   CANCER

Dual roles of a variable number of tandem repeat polymorphism in the TERT gene in lung cancer

(2010) Guang Jin et al.   CANCER SCIENCE

A Genomic Portrait of Human Microsatellite Variation

(2010) B. A. Payseur et al.   MOLECULAR BIOLOGY AND EVOLUTION

Epigenetic regulation of microRNA expression in colorectal cancer

(2009) Eva Bandres et al.   INTERNATIONAL JOURNAL OF CANCER

DNA variations in human and medical genetics: 25 years of my experience

(2009) Yusuke Nakamura   JOURNAL OF HUMAN GENETICS