Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK)

Diversity of spoilage fungi associated with various French dairy products

(2017) Lucille Garnier et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Microbiome analysis and confocal microscopy of used kitchen sponges reveal massive colonization by Acinetobacter, Moraxella and Chryseobacterium species

(2017) Massimiliano Cardinale et al.   Scientific Reports

A survey of xerophilic Aspergillus from indoor environment, including descriptions of two new section Aspergillus species producing eurotium-like sexual states

(2017) Cobus M. Visagie et al.   MycoKeys

Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory

(2017) R. Henrik Nilsson et al.   MycoKeys

Ten questions concerning the microbiomes of buildings

(2016) Rachel I. Adams et al.   BUILDING AND ENVIRONMENT

Urban Dust Microbiome: Impact on Later Atopy and Wheezing

(2016) Christina Tischer et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Invasive Fungal Infections Acquired from Contaminated Food or Nutritional Supplements: A Review of the Literature

(2016) Kaitlin Benedict et al.   Foodborne Pathogens and Disease

Critical moisture conditions for fungal decay of modified wood by basidiomycetes as detected by pile tests

(2016) Linda Meyer et al.   HOLZFORSCHUNG

Comparison of methods for assessing temporal variation of growth of fungi on building materials

(2016) Jacob Mensah-Attipoe et al.   MICROBIOLOGY-SGM

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

(2016) Kessy Abarenkov et al.   MycoKeys

Top 50 most wanted fungi

(2016) R. Henrik Nilsson et al.   MycoKeys

Rhinitis, Ocular, Throat and Dermal Symptoms, Headache and Tiredness among Students in Schools from Johor Bahru, Malaysia: Associations with Fungal DNA and Mycotoxins in Classroom Dust

(2016) Dan Norbäck et al.   PLoS One

Indoor fungi: companions and contaminants

(2015) A. Nevalainen et al.   INDOOR AIR

International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database—the quality controlled standard tool for routine identification of human and animal pathogenic fungi

(2015) Laszlo Irinyi et al.   MEDICAL MYCOLOGY

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

(2015) R. Henrik Nilsson et al.   MICROBES AND ENVIRONMENTS

The International Nucleotide Sequence Database Collaboration

(2015) Guy Cochrane et al.   NUCLEIC ACIDS RESEARCH

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

(2015) Nuala A. O'Leary et al.   NUCLEIC ACIDS RESEARCH

DNA sequence-based identification of Fusarium: Current status and future directions

(2015) Kerry O’Donnell et al.   PHYTOPARASITICA

Application of the Phylogenetic Species Concept to Wallemia sebi from House Dust and Indoor Air Revealed by Multi-Locus Genealogical Concordance

(2015) Hai D. T. Nguyen et al.   PLoS One

A Taxonomic Revision of the Wallemia sebi Species Complex

(2015) Sašo Jančič et al.   PLoS One

Phylogenetic classification of yeasts and related taxa within Pucciniomycotina

(2015) Q.-M. Wang et al.   STUDIES IN MYCOLOGY

Towards an integrated phylogenetic classification of the Tremellomycetes

(2015) X.-Z. Liu et al.   STUDIES IN MYCOLOGY

On the reclassification of species assigned to Candida and other anamorphic ascomycetous yeast genera based on phylogenetic circumscription

(2014) Heide-Marie Daniel et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Use of gene sequence analyses and genome comparisons for yeast systematics

(2014) C. P. Kurtzman   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Polyphasic taxonomy of the genus Talaromyces

(2014) N. Yilmaz et al.   STUDIES IN MYCOLOGY

Identification and nomenclature of the genus Penicillium

(2014) C.M. Visagie et al.   STUDIES IN MYCOLOGY

A first comprehensive census of fungi in soil reveals both hyperdiversity and fine-scale niche partitioning

(2013) D. Lee Taylor et al.   ECOLOGICAL MONOGRAPHS

Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances

(2013) Rachel I Adams et al.   ISME Journal

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment

(2013) Elizabeth M Glass et al.   ISME Journal

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

New penicillin-producing Penicillium species and an overview of section Chrysogena

(2013) J. Houbraken et al.   PERSOONIA

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fungal pollution of indoor environments and its management

(2012) A.A. Haleem Khan et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences

(2012) R. Henrik Nilsson et al.   MycoKeys

Aspergillus section Versicolores: nine new species and multilocus dNA sequence based phylogeny

(2012) Zeljko Jurjevic et al.   IMA Fungus

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

Tidying Up International Nucleotide Sequence Databases: Ecological, Geographical and Sequence Quality Annotation of ITS Sequences of Mycorrhizal Fungi

(2011) Leho Tedersoo et al.   PLoS One

PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

(2010) Kessy Abarenkov et al.   Evolutionary Bioinformatics

The Promise and Pitfalls of Sequence-Based Identification of Plant-Pathogenic Fungi and Oomycetes

(2010) Seogchan Kang et al.   PHYTOPATHOLOGY

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics

(2010) A. S. Amend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA