4.3 Article

Some indazoles reduced the activity of human serum paraoxonase 1, an antioxidant enzyme: in vitro inhibition and molecular modeling studies

期刊

ARCHIVES OF PHYSIOLOGY AND BIOCHEMISTRY
卷 125, 期 5, 页码 387-395

出版社

TAYLOR & FRANCIS LTD
DOI: 10.1080/13813455.2018.1470646

关键词

Enzyme inhibition; molecular modeling; paraoxonase 1; purification; indazole

向作者/读者索取更多资源

Background: Paraoxonase 1 (PON1: EC 3.1.8.1) is a vital antioxidant enzyme against mainly atherosclerosis and many other diseases associated with oxidative stress. Thus, studies related to PON1 have an important place in the pharmacology. In this study, we aimed to evaluate the in vitro inhibition effects of some indazoles on the activity of human PON1. Methods: PON1 was purified from human serum with a specific activity of 5000?U/mg and 13.50% yield by using simple chromatographic methods. Results: The indazoles showed K-i values in a range of 26.0???3.00?111???31.0??M against hPON1. All these indazoles exhibited competitive inhibition. In addition, molecular docking studies were performed in order to assess the probable binding mechanisms into the active site of hPON1. Molecular modeling studies confirmed our results. Conclusions: Inhibition of PON1 by indazoles supplies a verification to further consideration of limitation dosage of indazole molecule groups as drug.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.3
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Biochemistry & Molecular Biology

Synthesis and characterization of novel acyl hydrazones derived from vanillin as potential aldose reductase inhibitors

Yeliz Demir, Feyzi Sinan Tokali, Erbay Kalay, Cuneyt Turkes, Pelin Tokali, Osman Nuri Aslan, Kivilcim Sendil, Sukru Beydemir

Summary: In the present study, a series of novel acyl hydrazone compounds were synthesized and investigated as inhibitors of the AR enzyme. Among them, compounds 5 and 10b showed significant inhibition against AR activity.

MOLECULAR DIVERSITY (2023)

Article Chemistry, Medicinal

A new series of hydrazones as small-molecule aldose reductase inhibitors

Mehlika D. Altintop, Yeliz Demir, Cuneyt Turkes, Remzi B. Ozturk, Zerrin Canturk, Sukru Beydemir, Ahmet Ozdemir

Summary: In this study, new compounds 1-15 were designed and synthesized as aldose reductase (AR) inhibitors. Compound 4 showed the highest potency as an AR inhibitor, with K-i and IC50 values of 0.177 and 0.297 mu M, respectively. It demonstrated no cytotoxic activity towards normal cells and exhibited proper interactions with crucial amino acid residues within the active site of AR. Compound 4 stands out as a promising AR inhibitor for further in vivo studies.

ARCHIV DER PHARMAZIE (2023)

Article Chemistry, Medicinal

Enzyme inhibition, molecular docking, and density functional theory studies of new thiosemicarbazones incorporating the 4-hydroxy-3,5-dimethoxy benzaldehyde motif

Yeliz Demir, Cuneyt Turkes, Muhammet S. Cavus, Musa Erdogan, Halit Muglu, Hasan Yakan, Sukru Beydemir

Summary: New Schiff base-bearing thiosemicarbazones were synthesized from 4-hydroxy-3,5-dimethoxy benzaldehyde and various isocyanates. The structures of the synthesized molecules were elucidated and their spectroscopic properties were determined using density functional theory calculations. The compounds exhibited potent inhibition effects against acetylcholinesterase and human carbonic anhydrases, and molecular docking studies confirmed the binding affinities of the most potent derivatives.

ARCHIV DER PHARMAZIE (2023)

Article Biochemistry & Molecular Biology

Exploration of 1,2,3-triazole linked benzenesulfonamide derivatives as isoform selective inhibitors of human carbonic anhydrase

Chnar Kakakhan, Cuneyt Turkes, Ozcan Gulec, Yeliz Demir, Mustafa Arslan, Gizem Ozkemahli, Sukru Beydemir

Summary: A series of novel inhibitors of human alpha-carbonic anhydrase (hCA) were designed using a tail approach. These inhibitors showed remarkable selectivity for tumor isoforms hCA IX and XII. Adding a lipophilic naphthyl tail to the analogues increased the inhibitory and selective activities against hCA XII. The compounds also exhibited inhibitory effects against a human lung adenocarcinoma cancer cell line.

BIOORGANIC & MEDICINAL CHEMISTRY (2023)

Article Biochemistry & Molecular Biology

Molecular Docking Studies and the Effect of Fluorophenylthiourea Derivatives on Glutathione-Dependent Enzymes

Yeliz Demir, Cuneyt Turkes, Omer Irfan Kufrevioglu, Sukru Beydemir

Summary: Cancer is a prevalent health issue that has been studied extensively in the past three decades. This study focused on the purification of GST and GR enzymes, which play important roles in cellular detoxification and protection against oxidative stress. The effects of fluorophenylthiourea derivatives on these enzymes were investigated, and 1-(2,6-difluorophenyl)thiourea showed the most promising inhibition effect. Molecular docking studies were conducted to explain the relationship between the inhibitors and the 3D structures of GST and GR.

CHEMISTRY & BIODIVERSITY (2023)

Article Biology

Virtual screening, molecular simulations and bioassays: Discovering novel microsomal prostaglandin E Synthase-1 (mPGES-1) inhibitors

Zeynep Yagmur Babaoglu, Deryanur Kilic

Summary: In this study, compounds with indole scaffold were screened using Glide to target mPGES-1. Molecular simulation studies were used to determine the stability of the compounds. Cell experiments demonstrated that these indole-containing compounds may be potential inhibitors of mPGES-1 and have therapeutic potential for cancer and inflammation. They also serve as lead inhibitors for novel molecule design.

COMPUTERS IN BIOLOGY AND MEDICINE (2023)

Article Chemistry, Medicinal

Novel acetic acid derivatives containing quinazolin-4(3H)-one ring: Synthesis, in vitro, and in silico evaluation of potent aldose reductase inhibitors

Feyzi Sinan Tokali, Yeliz Demir, Cuneyt Turkes, Busra Dincer, Sukru Beydemir

Summary: A series of acetic acid derivatives containing quinazolin-4(3H)-one ring were synthesized and tested for AR inhibitory effect. Compound 19 showed the strongest inhibitory effect with nanomolar activity. It also exhibited lower toxicity against normal cells and had good absorption, distribution, metabolism, and excretion properties.

DRUG DEVELOPMENT RESEARCH (2023)

Article Biochemistry & Molecular Biology

Assessment of hypolipidemic and anti-inflammatory properties of walnut (Juglans regia) seed coat extract and modulates some metabolic enzymes activity in triton WR-1339-induced hyperlipidemia in rat kidney, liver, and heart

Esra Palabiyik, Ayse Nurseli Sulumer, Handan Uguz, Bahri Avci, Seda Askin, Hakan Askin, Yeliz Demir

Summary: This study aimed to investigate the potential reparative impact of ethanol extract walnut seed coat (E-WSC) on metabolic enzymes activity in hyperlipidemia-induced rats. The results showed that E-WSC improved the effects of hyperlipidemia on balance and prevented alterations in the activity of metabolic enzymes. Therefore, E-WSC powder may be a promising natural compound for the treatment of cognitive disorders and hyperlipidemia as adjuvant therapy.

JOURNAL OF MOLECULAR RECOGNITION (2023)

Article Chemistry, Physical

A novel series of thiosemicarbazone hybrid scaffolds: Design, synthesis, DFT studies, metabolic enzyme inhibition properties, and molecular docking calculations

Hasan Yakan, Halit Muglu, Cuneyt Turkes, Yeliz Demir, Musa Erdogan, Muhammet Serdar Cavus, Sukru Beydemir

Summary: This study synthesized fourteen new thiosemicarbazone derivatives and characterized their structures. The compounds exhibited potent inhibition effect on acetylcholinesterase and carbonic anhydrases. DFT analyzes and molecular docking studies were conducted to predict enzyme inhibition properties and confirm the most powerful derivatives. These novel thiosemicarbazone derivatives may have potential in the treatment of Alzheimer's disease, idiopathic intracranial hypertension, glaucoma, and related conditions.

JOURNAL OF MOLECULAR STRUCTURE (2023)

Article Biochemistry & Molecular Biology

Acetylphenyl-substituted imidazolium salts: synthesis, characterization, in silico studies and inhibitory properties against some metabolic enzymes

Ozlem Demirci, Burcu Tezcan, Yeliz Demir, Tugba Taskin-Tok, Yetkin Gok, Aydin Aktas, Bilgehan Guzel, Ilhami Gulcin

Summary: In this study, we synthesized thirteen new 1-(4-acetylphenyl)-3-alkylimidazolium salts and investigated their inhibition activities against AChE and hCAs. The synthesized compounds showed highly potent inhibition effects, with most of them outperforming the standard inhibitors.

MOLECULAR DIVERSITY (2023)

Article Chemistry, Multidisciplinary

Exploration of Some Bis-Sulfide and Bis-Sulfone Derivatives as Non-Classical Aldose Reductase Inhibitors

Cueneyt Turkes, Yeliz Demir, Abdullah Bicer, Gunseli Turgut Cin, Mehmet Serdar Gultekin, Sukru Beydemir

Summary: Aldose reductase (AR), an enzyme that converts glucose to fructose, plays an important role in diabetic complications. This study evaluated the inhibitory potential of bis-sulfide and bis-sulfone derivatives on AR. The results showed that these derivatives exhibited activity against AR, with some showing higher inhibitory activity than the currently utilized inhibitor in treatment.

CHEMISTRYSELECT (2023)

Article Biochemistry & Molecular Biology

Ornamental cabbage (Brassica oleracea var. acephala) responses to phytase enzyme purified from Lactobacillus coryniformis application

Neslihan Dikbas, Fazilet Parlakova Karagoz, Sevda Ucar, Yeliz Demir

Summary: In order to improve the quality and yield of ornamental plants, especially potted ornamental plants, organic substances that create a significant cost in cultivation are added to the growing medium. This study evaluated the impact of inoculation of purified phytase at different levels in seeds and soaking times on the growth and decorative values of ornamental cabbage plants. The application of purified phytase generally improved the observed parameters, with the highest level of phytase enzyme doses resulting in increased plant height, main stem height, and stem diameter. The study showed that purified phytase enzyme can enhance the quality of ornamental cabbage and has potential applications in agricultural biotechnology.

BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY (2023)

Article Biochemistry & Molecular Biology

Protective effect of bromelain on some metabolic enzyme activities in tyloxapol-induced hyperlipidemic rats

Ayse Nurseli Sulumer, Esra Palabiyik, Bahri Avci, Handan Uguz, Yeliz Demir, Muhammet Serhat Ozaslan, Hakan Askin

Summary: The study found that bromelain has a protective effect on the activity of certain metabolic enzymes in the heart, kidney, and liver of rats with tyloxapol-induced hyperlipidemia, demonstrating its regulatory effect on tissues and enzyme activities.

BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY (2023)

Article Biology

Production, purification and characterization of novel fibrinolytic enzyme from Bacillus atrophaeus V4

Ayse Varol, Seyda Albayrak, Hakan Ozkan, Yeliz Demir, Mesut Taskin, Ahmet Adiguzel

Summary: This study aimed to investigate the fibrinolytic enzyme-producing potentials of locally isolated soil bacteria and to purify and characterize the fibrinolytic enzyme of the most potent bacterial isolate. Among 40 isolates, the isolate V4 showed the highest potential. Based on 16S rRNA sequence analysis, the isolate V4 was identified as Bacillus atrophaeus. The optimal parameters for fibrinolytic enzyme production from B. atrophaeus were determined.

BIOLOGIA (2023)

Article Biochemistry & Molecular Biology

Benzimidazolium Salts Bearing Nitrile Moieties: Synthesis, Enzyme Inhibition Profiling, and Molecular Docking Analysis for Carbonic Anhydrase and Acetylcholinesterase

Erkan Oner, Yetkin Gok, Yeliz Demir, Tugba Taskin-Tok, Aydin Aktas, Ilhami Gulcin, Serap Yalin

Summary: This study presents the synthesis and characterization of a series of benzimidazolium salts, and investigates their enzyme inhibition abilities against acetylcholinesterase and carbonic anhydrase. The results show that these salts have potent inhibition effects. The pharmacokinetic properties of the compounds were also predicted.

CHEMISTRY & BIODIVERSITY (2023)

暂无数据