Spatiotemporal Dynamics of Ammonia-Oxidizing Thaumarchaeota in Distinct Arctic Water Masses

Thaumarchaeal ecotype distributions across the equatorial Pacific Ocean and their potential roles in nitrification and sinking flux attenuation

(2017) Alyson E. Santoro et al.   LIMNOLOGY AND OCEANOGRAPHY

Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees

(2016) Zilong He et al.   NUCLEIC ACIDS RESEARCH

Oceanic fronts: transition zones for bacterioplankton community composition

(2016) Federico Baltar et al.   Environmental Microbiology Reports

Geographic Distribution of Archaeal Ammonia Oxidizing Ecotypes in the Atlantic Ocean

(2016) Eva Sintes et al.   Frontiers in Microbiology

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Seasonal variability and fluxes of nitrate in the surface waters over the Arctic shelf slope

(2015) Achim Randelhoff et al.   GEOPHYSICAL RESEARCH LETTERS

Macroecological patterns of archaeal ammonia oxidizers in the Atlantic Ocean

(2015) Eva Sintes et al.   MOLECULAR ECOLOGY

Environmental Variables Shaping the Ecological Niche of Thaumarchaeota in Soil: Direct and Indirect Causal Effects

(2015) Jin-Kyung Hong et al.   PLoS One

Impact of recirculation on the East Greenland Current in Fram Strait: Results from moored current meter measurements between 1997 and 2009

(2014) L. de Steur et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Differential contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal surface waters

(2014) Jason M Smith et al.   ISME Journal

Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation

(2014) W. Qin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Archaeal amoA and ureC genes and their transcriptional activity in the Arctic Ocean

(2014) Estelle Pedneault et al.   Scientific Reports

Archaea in Biogeochemical Cycles

(2013) Pierre Offre et al.   Annual Review of Microbiology

Is dispersal limitation more prevalent in the ocean?

(2013) Diane S. Srivastava et al.   OIKOS

An Analysis of Thaumarchaeota Populations from the Northern Gulf of Mexico

(2013) Bradley B. Tolar et al.   Frontiers in Microbiology

ArchaealamoA gene diversity points to distinct biogeography of ammonia-oxidizingCrenarchaeotain the ocean

(2012) Eva Sintes et al.   ENVIRONMENTAL MICROBIOLOGY

A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters

(2012) Joseph J Grzymski et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Role for urea in nitrification by polar marine Archaea

(2012) L. Alonso-Saez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global Biodiversity of Aquatic Ammonia-Oxidizing Archaea is Partitioned by Habitat

(2012) Steven J. Biller et al.   Frontiers in Microbiology

Abundance, Diversity, and Activity of Ammonia-Oxidizing Prokaryotes in the Coastal Arctic Ocean in Summer and Winter

(2011) Glenn D. Christman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

(2011) Michael Pester et al.   ENVIRONMENTAL MICROBIOLOGY

Differential photoinhibition of bacterial and archaeal ammonia oxidation

(2011) Stephanie N. Merbt et al.   FEMS MICROBIOLOGY LETTERS

Arctic Ocean Microbial Community Structure before and after the 2007 Record Sea Ice Minimum

(2011) André M. Comeau et al.   PLoS One

Biogenic carbon flows through the planktonic food web of the Amundsen Gulf (Arctic Ocean): A synthesis of field measurements and inverse modeling analyses

(2011) Alexandre Forest et al.   PROGRESS IN OCEANOGRAPHY

Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean

(2011) B. K. Swan et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Major contribution of autotrophy to microbial carbon cycling in the deep North Atlantic’s interior

(2010) Thomas Reinthaler et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current

(2010) Alyson E. Santoro et al.   ENVIRONMENTAL MICROBIOLOGY

Ammonium regeneration and nitrification rates in the oligotrophic Atlantic Ocean: Implications for new production estimates

(2010) Darren R. Clark et al.   LIMNOLOGY AND OCEANOGRAPHY

Water mass-specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing

(2010) HÉLÈNE AGOGUÉ et al.   MOLECULAR ECOLOGY

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ammonia-oxidizingArchaeain the Arctic Ocean and Antarctic coastal waters

(2009) Karen M. Kalanetra et al.   ENVIRONMENTAL MICROBIOLOGY

Hydrography shapes bacterial biogeography of the deep Arctic Ocean

(2009) Pierre E Galand et al.   ISME Journal

Archaeal ammonia oxidizers and nirS-type denitrifiers dominate sediment nitrifying and denitrifying populations in a subtropical macrotidal estuary

(2009) Guy C J Abell et al.   ISME Journal

Community structure of marine bacterioplankton: patterns, networks, and relationships to function

(2008) JA Fuhrman et al.   AQUATIC MICROBIAL ECOLOGY

Winter-to-summer changes in the composition and single-cell activity of near-surface Arctic prokaryotes

(2008) Laura Alonso-Sáez et al.   ENVIRONMENTAL MICROBIOLOGY

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary

(2008) Alyson E. Santoro et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California

(2008) J Michael Beman et al.   ISME Journal

Hydrography of the West Spitsbergen Current, Svalbard Branch: Autumn 2001

(2008) Edward D. Cokelet et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic

(2008) Hélène Agogué et al.   NATURE