Time- and polarity-dependent proteomic changes associated with homeostatic scaling at central synapses

Cell-type-specific metabolic labeling of nascent proteomes in vivo

(2017) Beatriz Alvarez-Castelao et al.   NATURE BIOTECHNOLOGY

An Intrinsic Transcriptional Program Underlying Synaptic Scaling during Activity Suppression

(2017) Katie Schaukowitch et al.   Cell Reports

VarElect: the phenotype-based variation prioritizer of the GeneCards Suite

(2016) Gil Stelzer et al.   BMC GENOMICS

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

Nascent Proteome Remodeling following Homeostatic Scaling at Hippocampal Synapses

(2016) Christoph T. Schanzenbächer et al.   NEURON

BONLAC: A combinatorial proteomic technique to measure stimulus-induced translational profiles in brain slices

(2016) Heather Bowling et al.   NEUROPHARMACOLOGY

2016 update of the PRIDE database and its related tools

(2016) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

GeneAnalytics: An Integrative Gene Set Analysis Tool for Next Generation Sequencing, RNAseq and Microarray Data

(2016) Shani Ben-Ari Fuchs et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Upregulation of μ3A Drives Homeostatic Plasticity by Rerouting AMPAR into the Recycling Endosomal Pathway

(2016) Celine C. Steinmetz et al.   Cell Reports

Cell type– and brain region–resolved mouse brain proteome

(2015) Kirti Sharma et al.   NATURE NEUROSCIENCE

NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data

(2015) Jianguo Xia et al.   Nature Protocols

Activity-dependent synaptic GRIP1 accumulation drives synaptic scaling up in response to action potential blockade

(2015) Melanie A. Gainey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FunRich: An open access standalone functional enrichment and interaction network analysis tool

(2015) Mohashin Pathan et al.   PROTEOMICS

DNA methylation regulates neuronal glutamatergic synaptic scaling

(2015) Jarrod P. Meadows et al.   Science Signaling

DNA methylation regulates neuronal glutamatergic synaptic scaling

(2015) Jarrod P. Meadows et al.   Science Signaling

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

LocTree3 prediction of localization

(2014) Tatyana Goldberg et al.   NUCLEIC ACIDS RESEARCH

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Homeostatic Signaling and the Stabilization of Neural Function

(2013) Graeme W. Davis   NEURON

1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data

(2012) Juergen Cox et al.   BMC BIOINFORMATICS

Homeostatic Synaptic Plasticity: Local and Global Mechanisms for Stabilizing Neuronal Function

(2011) G. Turrigiano   Cold Spring Harbor Perspectives in Biology

Synaptic Scaling Requires the GluR2 Subunit of the AMPA Receptor

(2009) M. A. Gainey et al.   JOURNAL OF NEUROSCIENCE

The Self-Tuning Neuron: Synaptic Scaling of Excitatory Synapses

(2008) Gina G. Turrigiano   CELL

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Ubiquitin, the proteasome and protein degradation in neuronal function and dysfunction

(2008) Hwan-Ching Tai et al.   NATURE REVIEWS NEUROSCIENCE

Activity-Dependent Regulation of Synaptic AMPA Receptor Composition and Abundance by β3 Integrins

(2008) Lorenzo A. Cingolani et al.   NEURON

Rapid Synaptic Scaling Induced by Changes in Postsynaptic Firing

(2008) Keiji Ibata et al.   NEURON