Integration of large-scale data for extraction of integrated Arabidopsis root cell-type specific models
出版年份 2018 全文链接
标题
Integration of large-scale data for extraction of integrated Arabidopsis root cell-type specific models
作者
关键词
-
出版物
Scientific Reports
Volume 8, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-05-15
DOI
10.1038/s41598-018-26232-8
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Natural variation of hormone levels in Arabidopsis roots and correlations with complex root architecture
- (2018) Sangseok Lee et al. Journal of Integrative Plant Biology
- Protein Degradation Rate in Arabidopsis thaliana Leaf Growth and Development
- (2017) Lei Li et al. PLANT CELL
- A systems approach reveals distinct metabolic strategies among the NCI-60 cancer cell lines
- (2017) Maike K. Aurich et al. PLoS Computational Biology
- Context-Specific Metabolic Model Extraction Based on Regularized Least Squares Optimization
- (2015) Semidán Robaina Estévez et al. PLoS One
- A multi-tissue genome-scale metabolic modeling framework for the analysis of whole plant systems
- (2015) Cristiana Gomes de Oliveira Dal'Molin et al. Frontiers in Plant Science
- Improved evidence-based genome-scale metabolic models for maize leaf, embryo, and endosperm
- (2015) Samuel M. D. Seaver et al. Frontiers in Plant Science
- Cell-to-Cell Communication during Lateral Root Development
- (2014) Kun Yue et al. Molecular Plant
- Constraint-based models predict metabolic and associated cellular functions
- (2014) Aarash Bordbar et al. NATURE REVIEWS GENETICS
- Bottom-up Metabolic Reconstruction of Arabidopsis and Its Application to Determining the Metabolic Costs of Enzyme Production
- (2014) A. Arnold et al. PLANT PHYSIOLOGY
- optGpSampler: An Improved Tool for Uniformly Sampling the Solution-Space of Genome-Scale Metabolic Networks
- (2014) Wout Megchelenbrink et al. PLoS One
- High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource
- (2014) Samuel M. D. Seaver et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic Evaluation of Methods for Integration of Transcriptomic Data into Constraint-Based Models of Metabolism
- (2014) Daniel Machado et al. PLoS Computational Biology
- Fast Reconstruction of Compact Context-Specific Metabolic Network Models
- (2014) Nikos Vlassis et al. PLoS Computational Biology
- Generalized framework for context-specific metabolic model extraction methods
- (2014) Semidán Robaina Estévez et al. Frontiers in Plant Science
- Hormonal crosstalk for root development: a combined experimental and modeling perspective
- (2014) Junli Liu et al. Frontiers in Plant Science
- GIM3E: condition-specific models of cellular metabolism developed from metabolomics and expression data
- (2013) Brian J. Schmidt et al. BIOINFORMATICS
- Multiscale Metabolic Modeling: Dynamic Flux Balance Analysis on a Whole-Plant Scale
- (2013) E. Grafahrend-Belau et al. PLANT PHYSIOLOGY
- High-resolution metabolic mapping of cell types in plant roots
- (2013) A. Moussaieff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Improving metabolic flux predictions using absolute gene expression data
- (2012) Dave Lee et al. BMC Systems Biology
- Reconstruction of genome-scale metabolic models for 126 human tissues using mCADRE
- (2012) Yuliang Wang et al. BMC Systems Biology
- A novel sensor to map auxin response and distribution at high spatio-temporal resolution
- (2012) Géraldine Brunoud et al. NATURE
- The protein expression landscape of the Arabidopsis root
- (2012) J. J. Petricka et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT
- (2012) Rasmus Agren et al. PLoS Computational Biology
- TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks
- (2011) Paul A Jensen et al. BMC Systems Biology
- Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism
- (2010) Livnat Jerby et al. Molecular Systems Biology
- C4GEM, a Genome-Scale Metabolic Model to Study C4 Plant Metabolism
- (2010) C. G. de Oliveira Dal'Molin et al. PLANT PHYSIOLOGY
- Auxin Control of Root Development
- (2010) P. Overvoorde et al. Cold Spring Harbor Perspectives in Biology
- Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network
- (2009) Bevan Chung et al. BMC Systems Biology
- A Genome-Scale Metabolic Model of Arabidopsis and Some of Its Properties
- (2009) M. G. Poolman et al. PLANT PHYSIOLOGY
- Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p
- (2009) J. F. Moxley et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Use of Randomized Sampling for Analysis of Metabolic Networks
- (2008) Jan Schellenberger et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Network-based prediction of human tissue-specific metabolism
- (2008) Tomer Shlomi et al. NATURE BIOTECHNOLOGY
- Context-Specific Metabolic Networks Are Consistent with Experiments
- (2008) Scott A. Becker et al. PLoS Computational Biology
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now