Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
出版年份 2018 全文链接
标题
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
作者
关键词
-
出版物
Nature Communications
Volume 9, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-06-04
DOI
10.1038/s41467-018-04550-9
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico
- (2018) Åshild J. Vågene et al. Nature Ecology & Evolution
- The Beaker phenomenon and the genomic transformation of northwest Europe
- (2018) Iñigo Olalde et al. NATURE
- Historical Y. pestis Genomes Reveal the European Black Death as the Source of Ancient and Modern Plague Pandemics
- (2016) Maria A. Spyrou et al. Cell Host & Microbe
- Ecological Opportunity, Evolution, and the Emergence of Flea-Borne Plague
- (2016) B. Joseph Hinnebusch et al. INFECTION AND IMMUNITY
- A High-CoverageYersinia pestisGenome from a Sixth-Century Justinianic Plague Victim
- (2016) Michal Feldman et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic insights into the origin of farming in the ancient Near East
- (2016) Iosif Lazaridis et al. NATURE
- The genetic history of Ice Age Europe
- (2016) Qiaomei Fu et al. NATURE
- 'Add, stir and reduce': Yersinia spp. as model bacteria for pathogen evolution
- (2016) Alan McNally et al. NATURE REVIEWS MICROBIOLOGY
- MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
- (2016) Daniel H. Huson et al. PLoS Computational Biology
- Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago
- (2015) Simon Rasmussen et al. CELL
- Genome-wide patterns of selection in 230 ancient Eurasians
- (2015) Iain Mathieson et al. NATURE
- Massive migration from the steppe was a source for Indo-European languages in Europe
- (2015) Wolfgang Haak et al. NATURE
- Population genomics of Bronze Age Eurasia
- (2015) Morten E. Allentoft et al. NATURE
- Early emergence of Yersinia pestis as a severe respiratory pathogen
- (2015) Daniel L. Zimbler et al. Nature Communications
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Retracing the Evolutionary Path that Led to Flea-Borne Transmission of Yersinia pestis
- (2014) Yi-Cheng Sun et al. Cell Host & Microbe
- Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
- (2014) David M Wagner et al. LANCET INFECTIOUS DISEASES
- Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis
- (2014) Kirsten I. Bos et al. NATURE
- leeHom: adaptor trimming and merging for Illumina sequencing reads
- (2014) Gabriel Renaud et al. NUCLEIC ACIDS RESEARCH
- Partial uracil-DNA-glycosylase treatment for screening of ancient DNA
- (2014) N. Rohland et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Silencing urease: A key evolutionary step that facilitated the adaptation ofYersinia pestisto the flea-borne transmission route
- (2014) Iman Chouikha et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- YpfΦ: a filamentous phage acquired by Yersinia pesti
- (2014) Anne Derbise et al. Frontiers in Microbiology
- mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters
- (2013) Hákon Jónsson et al. BIOINFORMATICS
- Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution
- (2013) Guy Baele et al. BMC BIOINFORMATICS
- Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments
- (2013) J. Dabney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis
- (2012) Y. Cui et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A draft genome of Yersinia pestis from victims of the Black Death
- (2011) Kirsten I. Bos et al. NATURE
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
- (2011) Martin Kircher et al. NUCLEIC ACIDS RESEARCH
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity
- (2010) Giovanna Morelli et al. NATURE GENETICS
- New approaches to population stratification in genome-wide association studies
- (2010) Alkes L. Price et al. NATURE REVIEWS GENETICS
- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Molecular Darwinian Evolution of Virulence in Yersinia pestis
- (2009) D. Zhou et al. INFECTION AND IMMUNITY
- Draft Genome Sequences of Yersinia pestis Isolates from Natural Foci of Endemic Plague in China
- (2009) M. Eppinger et al. JOURNAL OF BACTERIOLOGY
- Attenuated enzootic (pestoides) isolates of Yersinia pestis express active aspartase
- (2009) S. W. Bearden et al. MICROBIOLOGY-SGM
- Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA
- (2009) Adrian W. Briggs et al. NUCLEIC ACIDS RESEARCH
- A missense mutation causes aspartase deficiency in Yersinia pestis
- (2008) R. E. Viola et al. MICROBIOLOGY-SGM
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now