Phylogenetic analyses and antimicrobial resistance profiles of Campylobacter spp. from diarrhoeal patients and chickens in Botswana
出版年份 2018 全文链接
标题
Phylogenetic analyses and antimicrobial resistance profiles of Campylobacter spp. from diarrhoeal patients and chickens in Botswana
作者
关键词
Campylobacter, Antimicrobial resistance, Chickens, Phylogenetics, Livestock, Poultry, Genome analysis, Phylogenetic analysis
出版物
PLoS One
Volume 13, Issue 3, Pages e0194481
出版商
Public Library of Science (PLoS)
发表日期
2018-03-22
DOI
10.1371/journal.pone.0194481
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Genetic diversity and antimicrobial resistance profiles of Campylobacter coli and Campylobacter jejuni isolated from broiler chicken in farms and at time of slaughter in central Italy
- (2017) S. Pergola et al. JOURNAL OF APPLIED MICROBIOLOGY
- Detection and prevalence of antimicrobial resistance genes in Campylobacter spp. isolated from chickens and humans
- (2017) Samantha Reddy et al. ONDERSTEPOORT JOURNAL OF VETERINARY RESEARCH
- Multilocus sequence typing ofCampylobacter jejuniandCampylobacter coliisolates from poultry, cattle and humans in Nigeria
- (2016) S. Ngulukun et al. JOURNAL OF APPLIED MICROBIOLOGY
- Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Antibiotic resistance profiles of Campylobacter species in the South Africa private health care sector
- (2016) Christiana O. Shobo et al. Journal of Infection in Developing Countries
- JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
- (2015) Michael Richter et al. BIOINFORMATICS
- Roary: rapid large-scale prokaryote pan genome analysis
- (2015) Andrew J. Page et al. BIOINFORMATICS
- Global Epidemiology of Campylobacter Infection
- (2015) Nadeem O. Kaakoush et al. CLINICAL MICROBIOLOGY REVIEWS
- Motility defects in Campylobacter jejuni defined gene deletion mutants caused by second-site mutations
- (2015) Stefan P. W. de Vries et al. MICROBIOLOGY-SGM
- World Health Organization Estimates of the Global and Regional Disease Burden of 22 Foodborne Bacterial, Protozoal, and Viral Diseases, 2010: A Data Synthesis
- (2015) Martyn D. Kirk et al. PLOS MEDICINE
- Correlation of Clinical Outcomes With Multiplex Molecular Testing of Stool From Children Admitted to Hospital With Gastroenteritis in Botswana
- (2015) Jeffrey M. Pernica et al. Journal of the Pediatric Infectious Diseases Society
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Human, food and animal Campylobacter spp. isolated in Portugal: High genetic diversity and antibiotic resistance rates
- (2014) Andreia Duarte et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- A single nucleotide in the promoter region modulates the expression of the -lactamase OXA-61 in Campylobacter jejuni
- (2014) X. Zeng et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
- (2014) Michael Inouye et al. Genome Medicine
- ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes
- (2013) Sushim Kumar Gupta et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Prevalence and Antimicrobial Resistance of Campylobacter spp. Isolated from Poultry Carcasses in Poland
- (2013) KINGA WIECZOREK et al. JOURNAL OF FOOD PROTECTION
- Antimicrobial resistance in Campylobacter: Susceptibility testing methods and resistance trends
- (2013) Beilei Ge et al. JOURNAL OF MICROBIOLOGICAL METHODS
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Campylobacter coli Isolates from Finnish Farrowing Farms Using Aminopenicillins: High Prevalence of blaOXA-61 and β-Lactamase Production, But Low MIC Values
- (2012) Pekka Juntunen et al. Foodborne Pathogens and Disease
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- BIGSdb: Scalable analysis of bacterial genome variation at the population level
- (2011) Keith A Jolley et al. BMC BIOINFORMATICS
- An Epidemiologic Review of Enteropathogens in Gaborone, Botswana: Shifting Patterns of Resistance in an HIV Endemic Region
- (2010) Jack S. Rowe et al. PLoS One
- -Lactamase-Mediated -Lactam Resistance in Campylobacter Species: Prevalence of Cj0299 (blaOXA-61) and Evidence for a Novel -Lactamase in C. jejuni
- (2009) D. J. Griggs et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Antibiotic resistance inCampylobacter: emergence, transmission and persistence
- (2009) Taradon Luangtongkum et al. Future Microbiology
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