Effect of land use and soil organic matter quality on the structure and function of microbial communities in pastoral soils: Implications for disease suppression

Cost of root disease on white clover growth in New Zealand dairy pastures

(2016) S.A. Wakelin et al.   AUSTRALASIAN PLANT PATHOLOGY

Soil immune responses

(2016) J. M. Raaijmakers et al.   SCIENCE

Challenges and opportunities in harnessing soil disease suppressiveness for sustainable pasture production

(2016) Bryony E.A. Dignam et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial and biochemical basis of a Fusarium wilt-suppressive soil

(2015) Jae-Yul Cha et al.   ISME Journal

Fungal invasion of the rhizosphere microbiome

(2015) Emilie Chapelle et al.   ISME Journal

Analyses of soil microbial community compositions and functional genes reveal potential consequences of natural forest succession

(2015) Jing Cong et al.   Scientific Reports

Community fingerprinting in a sequencing world

(2014) Josie van Dorst et al.   FEMS MICROBIOLOGY ECOLOGY

Exploring the immediate and long-term impact on bacterial communities in soil amended with animal and urban organic waste fertilizers using pyrosequencing and screening for horizontal transfer of antibiotic resistance

(2014) Leise Riber et al.   FEMS MICROBIOLOGY ECOLOGY

Fungal Community Structure in Disease Suppressive Soils Assessed by 28S LSU Gene Sequencing

(2014) C. Ryan Penton et al.   PLoS One

Physicochemical properties of 50 New Zealand pasture soils: a starting point for assessing and managing soil microbial resources

(2013) SA Wakelin et al.   NEW ZEALAND JOURNAL OF AGRICULTURAL RESEARCH

Diversity and Natural Functions of Antibiotics Produced by Beneficial and Plant Pathogenic Bacteria

(2012) Jos M. Raaijmakers et al.   Annual Review of Phytopathology

Response of soil microbial communities to contrasted histories of phosphorus fertilisation in pastures

(2012) Steve Wakelin et al.   APPLIED SOIL ECOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

Variation in microbial responses andRhizoctonia solaniAG2-2IIIB growth in soil under different organic amendment regimes

(2012) Leonard S. van Overbeek et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Assessment of the specificity of Burkholderia and Pseudomonas qPCR assays for detection of these genera in soil using 454 pyrosequencing

(2012) Lasse Bergmark et al.   FEMS MICROBIOLOGY LETTERS

Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland

(2012) Yunfeng Yang et al.   GLOBAL CHANGE BIOLOGY

Plant diversity improves protection against soil-borne pathogens by fostering antagonistic bacterial communities

(2012) Ellen Latz et al.   JOURNAL OF ECOLOGY

Assessment of Variation in Bacterial Composition among Microhabitats in a Mangrove Environment Using DGGE Fingerprints and Barcoded Pyrosequencing

(2012) Daniel F. R. Cleary et al.   PLoS One

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Effects of soil type and farm management on soil ecological functional genes and microbial activities

(2010) Jennifer R Reeve et al.   ISME Journal

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Quantitative Community Fingerprinting Methods for Estimating the Abundance of Operational Taxonomic Units in Natural Microbial Communities

(2009) A. Ramette   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

T-REX: software for the processing and analysis of T-RFLP data

(2009) Steven W Culman et al.   BMC BIOINFORMATICS

Chitinase genes revealed and compared in bacterial isolates, DNA extracts and a metagenomic library from a phytopathogen-suppressive soil

(2009) Karin Hjort et al.   FEMS MICROBIOLOGY ECOLOGY

Comparison of rhizobacterial community composition in soil suppressive or conducive to tobacco black root rot disease

(2009) Martina Kyselková et al.   ISME Journal

Pseudomonas fluorescensand closely-related fluorescent pseudomonads as biocontrol agents of soil-borne phytopathogens

(2009) O. Couillerot et al.   LETTERS IN APPLIED MICROBIOLOGY

Pasture management clearly affects soil microbial community structure and N-cycling bacteria

(2008) Steven A. Wakelin et al.   PEDOBIOLOGIA

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL

Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils

(2007) S.A. Wakelin et al.   SOIL BIOLOGY & BIOCHEMISTRY