16S rRNA gene metabarcoding and TEM reveals different ecological strategies within the genus Neogloboquadrina (planktonic foraminifer)

Patterns of bacterial diversity in the marine planktonic particulate matter continuum

(2017) Mireia Mestre et al.   ISME Journal

Physical and biogeochemical controls on the variability in surface pH and calcium carbonate saturation states in the Atlantic sectors of the Arctic and Southern Oceans

(2016) Eithne Tynan et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Sea cucumber (Apostichopus japonicus) eukaryotic food source composition determined by 18s rDNA barcoding

(2016) Hongye Zhang et al.   MARINE BIOLOGY

Molecular trophic markers in marine food webs and their potential use for coral ecology

(2016) Miguel Costa Leal et al.   Marine Genomics

Metabarcoding and metabolome analyses of copepod grazing reveal feeding preference and linkage to metabolite classes in dynamic microbial plankton communities

(2016) Jessica L. Ray et al.   MOLECULAR ECOLOGY

Geochemical imprints of genotypic variants of Globigerina bulloides in the Arabian Sea

(2016) Aleksey Yu. Sadekov et al.   PALEOCEANOGRAPHY

Defining Planktonic Protist Functional Groups on Mechanisms for Energy and Nutrient Acquisition: Incorporation of Diverse Mixotrophic Strategies

(2016) Aditee Mitra et al.   PROTIST

Intracellular Isotope Localization in Ammonia sp. (Foraminifera) of Oxygen-Depleted Environments: Results of Nitrate and Sulfate Labeling Experiments

(2016) Hidetaka Nomaki et al.   Frontiers in Microbiology

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Causes and impacts of the 2014 warm anomaly in the NE Pacific

(2015) Nicholas A. Bond et al.   GEOPHYSICAL RESEARCH LETTERS

PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy

(2015) Johan Decelle et al.   Molecular Ecology Resources

The global ocean microbiome

(2015) M. A. Moran   SCIENCE

Determinants of community structure in the global plankton interactome

(2015) G. Lima-Mendez et al.   SCIENCE

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

(2014) Susannah J Salter et al.   BMC BIOLOGY

The Earth Microbiome project: successes and aspirations

(2014) Jack A Gilbert et al.   BMC BIOLOGY

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

(2014) Jacob A Cram et al.   ISME Journal

Common Contaminants in Next-Generation Sequencing That Hinder Discovery of Low-Abundance Microbes

(2014) Martin Laurence et al.   PLoS One

Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters

(2013) Fernando Unrein et al.   ISME Journal

Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists

(2013) Cheryl-Emiliane T Chow et al.   ISME Journal

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Ecological partitioning and diversity in tropical planktonic foraminifera

(2012) Heidi A Seears et al.   BMC EVOLUTIONARY BIOLOGY

Single cell genomics: an individual look at microbes

(2012) Ramunas Stepanauskas   CURRENT OPINION IN MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Effect of ocean acidification and temperature increase on the planktonic foraminifer Neogloboquadrina pachyderma (sinistral)

(2012) C. Manno et al.   POLAR BIOLOGY

Mixotrophic basis of Atlantic oligotrophic ecosystems

(2012) M. Hartmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Marine bacterial, archaeal and protistan association networks reveal ecological linkages

(2011) Joshua A Steele et al.   ISME Journal

Unveiling in situ interactions between marine protists and bacteria through single cell sequencing

(2011) Manuel Martinez-Garcia et al.   ISME Journal

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Temperature effect on respiration and photosynthesis of the symbiont-bearing planktonic foraminiferaGlobigerinoides ruber,Orbulina universa, andGlobigerinella siphonifera

(2011) F. Lombard et al.   LIMNOLOGY AND OCEANOGRAPHY

The Importance of Chitin in the Marine Environment

(2011) Claudiana P. Souza et al.   MARINE BIOTECHNOLOGY

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists

(2011) H. S. Yoon et al.   SCIENCE

Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean

(2010) Ludwig Jardillier et al.   ISME Journal

TRADITIONAL AND EMERGING GEOCHEMICAL PROXIES IN FORAMINIFERA

(2010) M. E. Katz et al.   JOURNAL OF FORAMINIFERAL RESEARCH

Calcium carbonate saturation states in the waters of the Canadian Arctic Archipelago and the Labrador Sea

(2010) Kumiko Azetsu-Scott et al.   JOURNAL OF GEOPHYSICAL RESEARCH

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Acquired phototrophy in aquatic protists

(2009) DK Stoecker et al.   AQUATIC MICROBIAL ECOLOGY

Sequencing free-living protists: the case for metagenomics

(2009) Scott C. Dawson et al.   ENVIRONMENTAL MICROBIOLOGY

Grazing rates and functional diversity of uncultured heterotrophic flagellates

(2009) Ramon Massana et al.   ISME Journal

CRYPTIC DIVERSITY IN PLANKTIC FORAMINIFERA IN THE NORTHWEST PACIFIC OCEAN

(2009) Y. Ujiie et al.   JOURNAL OF FORAMINIFERAL RESEARCH

Environmental versus biomineralization controls on the intratest variation in the trace element composition of the planktonic foraminiferaG. inflataandG. scitula

(2009) Ed C. Hathorne et al.   PALEOCEANOGRAPHY

Ocean's least productive waters are expanding

(2008) Jeffrey J. Polovina et al.   GEOPHYSICAL RESEARCH LETTERS

The genetic diversity of planktic foraminifera and the global distribution of ribosomal RNA genotypes

(2008) Kate F. Darling et al.   MARINE MICROPALEONTOLOGY

High bacterivory by the smallest phytoplankton in the North Atlantic Ocean

(2008) Mikhail V. Zubkov et al.   NATURE