Dissecting genomic hotspots underlying seed protein, oil, and sucrose content in an interspecific mapping population of soybean using high-density linkage mapping

Genetic mapping and haplotype analysis of a locus for quantitative resistance to Fusarium graminearum in soybean accession PI 567516C

(2017) Peng Cheng et al.   THEORETICAL AND APPLIED GENETICS

Molecular mapping and genomics of soybean seed protein: a review and perspective for the future

(2017) Gunvant Patil et al.   THEORETICAL AND APPLIED GENETICS

An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype

(2017) Austin A. Dobbels et al.   G3-Genes Genomes Genetics

Identification and Fine Mapping of a Soybean Seed Protein QTL from PI 407788A on Chromosome 15

(2016) Myungsik Kim et al.   CROP SCIENCE

Genetic analysis of shoot fresh weight in a cross of wild (G. soja) and cultivated (G. max) soybean

(2016) Sovetgul Asekova et al.   MOLECULAR BREEDING

Identification and Validation of Loci Governing Seed Coat Color by Combining Association Mapping and Bulk Segregation Analysis in Soybean

(2016) Jian Song et al.   PLoS One

Landscape of genomic diversity and trait discovery in soybean

(2016) Babu Valliyodan et al.   Scientific Reports

Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean

(2016) Gunvant Patil et al.   Scientific Reports

Multi-Population Selective Genotyping to Identify Soybean [ Glycine max (L.) Merr.] Seed Protein and Oil QTLs

(2016) Piyaporn Phansak et al.   G3-Genes Genomes Genetics

Genome-wide identification and Phylogenic analysis of kelch motif containing ACBP in Brassica napus

(2015) Nadia Haingotiana Raboanatahiry et al.   BMC GENOMICS

Combining powers of linkage and association mapping for precise dissection of QTL controlling resistance to gray leaf spot disease in maize (Zea mays L.)

(2015) Jafar Mammadov et al.   BMC GENOMICS

Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

(2015) T. D. Vuong et al.   BMC GENOMICS

Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis

(2015) Gunvant Patil et al.   BMC GENOMICS

Identification of Quantitative Trait Loci for Oil Content in Soybean Seed

(2015) Jiao Wang et al.   CROP SCIENCE

A high-resolution genetic linkage map of soybean based on 357 recombinant inbred lines genotyped with BARCSoySNP6K

(2015) Sungwoo Lee et al.   MOLECULAR BREEDING

Identification and mapping of stable QTL for protein content in soybean seeds

(2015) J. Wang et al.   MOLECULAR BREEDING

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

ZmZHOUPI, an endosperm-specific basic helix-loop-helix transcription factor involved in maize seed development

(2015) Aurélie Grimault et al.   PLANT JOURNAL

A precise spacing between the NPA domains of aquaporins is essential for silicon permeability in plants

(2015) Rupesh Kailasrao Deshmukh et al.   PLANT JOURNAL

QTL for seed protein and amino acids in the Benning × Danbaekkong soybean population

(2015) C. V. Warrington et al.   THEORETICAL AND APPLIED GENETICS

Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.)

(2015) Sandip M Kale et al.   Scientific Reports

Fingerprinting Soybean Germplasm and Its Utility in Genomic Research

(2015) Qijian Song et al.   G3-Genes Genomes Genetics

A Population Structure and Genome-Wide Association Analysis on the USDA Soybean Germplasm Collection

(2015) Nonoy Bandillo et al.   Plant Genome

Expanding Omics Resources for Improvement of Soybean Seed Composition Traits

(2015) Juhi Chaudhary et al.   Frontiers in Plant Science

A genome-wide association study of seed protein and oil content in soybean

(2014) Eun-Young Hwang et al.   BMC GENOMICS

Identification of loci governing eight agronomic traits using a GBS-GWAS approach and validation by QTL mapping in soya bean

(2014) Humira Sonah et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing

(2014) Xinpeng Qi et al.   Nature Communications

Genetic Mapping and Confirmation of Quantitative Trait Loci for Seed Protein and Oil Contents and Seed Weight in Soybean

(2013) Safiullah M. Pathan et al.   CROP SCIENCE

Development and Evaluation of SoySNP50K, a High-Density Genotyping Array for Soybean

(2013) Qijian Song et al.   PLoS One

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

Pinpointing genes underlying the quantitative trait loci for root-knot nematode resistance in palaeopolyploid soybean by whole genome resequencing

(2013) X. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multivariate calibration by near infrared spectroscopy for the determination of the vitamin E and the antioxidant properties of quinoa

(2013) Guillermo Wells Moncada et al.   TALANTA

SOAP3: ultra-fast GPU-based parallel alignment tool for short reads

(2012) C.-M. Liu et al.   BIOINFORMATICS

Tracing soybean domestication history: From nucleotide to genome

(2012) Moon Young Kim et al.   BREEDING SCIENCE

SWEET as Sugar: New Sucrose Effluxers in Plants

(2012) R. Frank Baker et al.   Molecular Plant

An Integrated Quantitative Trait Locus Map of Oil Content in Soybean, Glycine max (L.) Merr., Generated Using a Meta-Analysis Method for Mining Genes

(2011) Zhao-ming QI et al.   Agricultural Sciences in China

Comparative visualization of genetic and physical maps with Strudel

(2011) M. Bayer et al.   BIOINFORMATICS

Loss-of-function mutations affecting a specific Glycine max R2R3 MYB transcription factor result in brown hilum and brown seed coats

(2011) Jason D Gillman et al.   BMC PLANT BIOLOGY

What should the genome-wide significance threshold be? Empirical replication of borderline genetic associations

(2011) Orestis A Panagiotou et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Down-regulation of UDP-glucuronic Acid Biosynthesis Leads to Swollen Plant Cell Walls and Severe Developmental Defects Associated with Changes in Pectic Polysaccharides

(2011) Rebecca Reboul et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

(2011) Xun Xu et al.   NATURE BIOTECHNOLOGY

Arabidopsis glabra2 mutant seeds deficient in mucilage biosynthesis produce more oil

(2011) Lin Shi et al.   PLANT JOURNAL

Flux of transcript patterns during soybean seed development

(2010) Sarah I Jones et al.   BMC GENOMICS

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

(2010) David L Hyten et al.   BMC GENOMICS

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean

(2010) Yung-Tsi Bolon et al.   BMC PLANT BIOLOGY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

In Silico Identification of Carboxylate Clamp Type Tetratricopeptide Repeat Proteins in Arabidopsis and Rice As Putative Co-Chaperones of Hsp90/Hsp70

(2010) Bishun D. Prasad et al.   PLoS One

Novel quantitative trait loci for broad-based resistance to soybean cyst nematode (Heterodera glycines Ichinohe) in soybean PI 567516C

(2010) Tri D. Vuong et al.   THEORETICAL AND APPLIED GENETICS

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH

Characterization of Maize Germplasm for the Chemical Composition of the Grain

(2009) Nicola Berardo et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

Endogenous, Tissue-Specific Short Interfering RNAs Silence the Chalcone Synthase Gene Family in Glycine max Seed Coats

(2009) J. H. Tuteja et al.   PLANT CELL

Efficient and Accurate Construction of Genetic Linkage Maps from the Minimum Spanning Tree of a Graph

(2008) Yonghui Wu et al.   PLoS Genetics