Genetic diversity in a collection of Italian long storage tomato landraces as revealed by SNP markers array

Targeted secondary metabolic and physico-chemical traits analysis to assess genetic variability within a germplasm collection of “long storage” tomatoes

(2018) Laura Siracusa et al.   FOOD CHEMISTRY

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(2017)   EVOLUTION

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phenotypic and molecular diversity in a collection of ‘Pomodoro di Sorrento’ Italian tomato landrace

(2016) Mario Parisi et al.   SCIENTIA HORTICULTURAE

Transcriptomic Changes Drive Physiological Responses to Progressive Drought Stress and Rehydration in Tomato

(2016) Paolo Iovieno et al.   Frontiers in Plant Science

Expansion and Function of Repeat Domain Proteins During Stress and Development in Plants

(2016) Manisha Sharma et al.   Frontiers in Plant Science

Comprehensive Analysis of ABA Effects on Ethylene Biosynthesis and Signaling during Tomato Fruit Ripening

(2016) Wangshu Mou et al.   PLoS One

Comprehensive RNA-Seq Analysis on the Regulation of Tomato Ripening by Exogenous Auxin

(2016) Jiayin Li et al.   PLoS One

Exploring a Tomato Landraces Collection for Fruit-Related Traits by the Aid of a High-Throughput Genomic Platform

(2015) Adriana Sacco et al.   PLoS One

Assessing the genetic variation in cultivated tomatoes (Solanum lycopersicum L.) using genome-wide single nucleotide polymorphisms

(2015) Sung-Chur Sim et al.   Horticulture Environment and Biotechnology

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations

(2014) Maria Ercolano et al.   BMC GENOMICS

An association mapping approach to identify favourable alleles for tomato fruit quality breeding

(2014) Valentino Ruggieri et al.   BMC PLANT BIOLOGY

Genetic variation of an Italian long shelf-life tomato (Solanum lycopersicon L.) collection by using SSR and morphological fruit traits

(2014) Francesco Mercati et al.   GENETIC RESOURCES AND CROP EVOLUTION

Genome-wide analysis and identification of stress-responsive genes of the CCCH zinc finger family in Solanum lycopersicum

(2014) Ruirui Xu   MOLECULAR GENETICS AND GENOMICS

Genomic analyses provide insights into the history of tomato breeding

(2014) Tao Lin et al.   NATURE GENETICS

The Ethylene Receptors ETHYLENE RESPONSE1 and ETHYLENE RESPONSE2 Have Contrasting Roles in Seed Germination of Arabidopsis during Salt Stress

(2014) R. L. Wilson et al.   PLANT PHYSIOLOGY

Genome-Wide Identification of MAPKK and MAPKKK Gene Families in Tomato and Transcriptional Profiling Analysis during Development and Stress Response

(2014) Jian Wu et al.   PLoS One

The postharvest tomato fruit quality of long shelf-life Mediterranean landraces is substantially influenced by irrigation regimes

(2014) Miquel À. Conesa et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

Fruit Development and Ripening

(2013) Graham B. Seymour et al.   Annual Review of Plant Biology

Whole genome resequencing in tomato reveals variation associated with introgression and breeding events

(2013) Mathilde Causse et al.   BMC GENOMICS

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Genetic diversity and population structure of a common bean (Phaseolus vulgaris L.) collection from Calabria (Italy)

(2012) Francesco Mercati et al.   GENETIC RESOURCES AND CROP EVOLUTION

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding

(2012) Sung-Chur Sim et al.   PLoS One

Variation Revealed by SNP Genotyping and Morphology Provides Insight into the Origin of the Tomato

(2012) Jose Blanca et al.   PLoS One

Single Nucleotide Polymorphism Discovery in Cultivated Tomato via Sequencing by Synthesis

(2012) John P. Hamilton et al.   Plant Genome

Genetic basis of long shelf life and variability into Penjar tomato

(2011) J. Casals et al.   GENETIC RESOURCES AND CROP EVOLUTION

Polyphenols as Chemotaxonomic Markers in Italian “Long-Storage” Tomato Genotypes

(2011) Laura Siracusa et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Reciprocal insights into adaptation from agricultural and evolutionary studies in tomato

(2010) Leonie C. Moyle et al.   Evolutionary Applications

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Genetic variation in tomato populations from four breeding programs revealed by single nucleotide polymorphism and simple sequence repeat markers

(2009) Jia Chen et al.   SCIENTIA HORTICULTURAE

Genetic diversity, structure and marker-trait associations in a collection of Italian tomato (Solanum lycopersicum L.) landraces

(2008) Andrea Mazzucato et al.   THEORETICAL AND APPLIED GENETICS