Whole genome amplification and exome sequencing of archived schistosome miracidia

Structural and enzymatic insights into species-specific resistance to schistosome parasite drug therapy

(2017) Alexander B. Taylor et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

SMCHD1 mutations associated with a rare muscular dystrophy can also cause isolated arhinia and Bosma arhinia microphthalmia syndrome

(2017) Natalie D Shaw et al.   NATURE GENETICS

Genetic diversity and selection of three nuclear genes in Schistosoma japonicum populations

(2017) Yaqi Li et al.   Parasites & Vectors

Phenotypic and genotypic monitoring of Schistosoma mansoni in Tanzanian schoolchildren five years into a preventative chemotherapy national control programme

(2017) Charlotte M. Gower et al.   Parasites & Vectors

Whole Genome Amplification and Reduced-Representation Genome Sequencing of Schistosoma japonicum Miracidia

(2017) Jonathan A. Shortt et al.   PLoS Neglected Tropical Diseases

Gaining and sustaining schistosomiasis control: study protocol and baseline data prior to different treatment strategies in five African countries

(2016) Amara E. Ezeamama et al.   BMC INFECTIOUS DISEASES

Independent origins of loss-of-function mutations conferring oxamniquine resistance in a Brazilian schistosome population

(2016) Frédéric D. Chevalier et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics

(2016) Michael G. Harvey et al.   SYSTEMATIC BIOLOGY

Genetic diversity, multiplicity of infection and population structure of Schistosoma mansoni isolates from human hosts in Ethiopia

(2015) Mulugeta Aemero et al.   BMC GENETICS

Development of novel multiplex microsatellite polymerase chain reactions to enable high-throughput population genetic studies of Schistosoma haematobium

(2015) B. L. Webster et al.   Parasites & Vectors

Reconstructing Colonization Dynamics of the Human Parasite Schistosoma mansoni following Anthropogenic Environmental Changes in Northwest Senegal

(2015) Frederik Van den Broeck et al.   PLoS Neglected Tropical Diseases

Efficient linkage mapping using exome capture and extreme QTL in schistosome parasites

(2014) Frédéric D Chevalier et al.   BMC GENOMICS

Whole-exome sequencing links TMCO1 defect syndrome with cerebro-facio-thoracic dysplasia

(2014) Davut Pehlivan et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

The promise of whole-exome sequencing in medical genetics

(2013) Bahareh Rabbani et al.   JOURNAL OF HUMAN GENETICS

Significant variance in genetic diversity among populations of Schistosoma haematobium detected using microsatellite DNA loci from a genome-wide database

(2013) Travis C Glenn et al.   Parasites & Vectors

Non-Invasive Sampling of Schistosomes from Humans Requires Correcting for Family Structure

(2013) Michelle L. Steinauer et al.   PLoS Neglected Tropical Diseases

DNA ‘barcoding’ of Schistosoma mansoni across sub-Saharan Africa supports substantial within locality diversity and geographical separation of genotypes

(2012) Bonnie L. Webster et al.   ACTA TROPICA

Population genetic structure of Schistosoma mansoni and Schistosoma haematobium from across six sub-Saharan African countries: Implications for epidemiology, evolution and control

(2012) Charlotte M. Gower et al.   ACTA TROPICA

Whole-genome sequence of Schistosoma haematobium

(2012) Neil D Young et al.   NATURE GENETICS

Schistosomiasis collection at NHM (SCAN)

(2012) Aidan M Emery et al.   Parasites & Vectors

Genetic Diversity within Schistosoma haematobium: DNA Barcoding Reveals Two Distinct Groups

(2012) Bonnie L. Webster et al.   PLoS Neglected Tropical Diseases

A Systematically Improved High Quality Genome and Transcriptome of the Human Blood Fluke Schistosoma mansoni

(2012) Anna V. Protasio et al.   PLoS Neglected Tropical Diseases

Chromatin structure changes around satellite repeats on the Schistosoma mansoni female sex chromosome suggest a possible mechanism for sex chromosome emergence

(2012) Julie MJ Lepesant et al.   GENOME BIOLOGY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Population genetics of Schistosoma haematobium: development of novel microsatellite markers and their application to schistosomiasis control in Mali

(2011) C. M. GOWER et al.   PARASITOLOGY

Exome sequencing: the expert view

(2011) Leslie G Biesecker et al.   GENOME BIOLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Applying evolutionary genetics to schistosome epidemiology

(2010) Michelle L. Steinauer et al.   INFECTION GENETICS AND EVOLUTION

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Efficient genotyping of Schistosoma mansoni miracidia following whole genome amplification

(2009) Claudia L.L. Valentim et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

The Schistosoma japonicum genome reveals features of host–parasite interplay

(2009)   NATURE

The genome of the blood fluke Schistosoma mansoni

(2009) Matthew Berriman et al.   NATURE