4.4 Article

Breaking down the lithification bias: the effect of preferential sampling of larger specimens on the estimate of species richness, evenness, and average specimen size

期刊

PALEOBIOLOGY
卷 44, 期 2, 页码 326-345

出版社

CAMBRIDGE UNIV PRESS
DOI: 10.1017/pab.2017.39

关键词

-

资金

  1. NASA Exobiology and Evolutionary Biology Program [NNX15AL27G]
  2. NSF Sedimentary Geology and Paleobiology Program [EAR-1528553]
  3. Paleontological Society
  4. Virginia Tech Department of Geosciences
  5. NASA [798348, NNX15AL27G] Funding Source: Federal RePORTER

向作者/读者索取更多资源

Lithification, the transition of unconsolidated sediments to fully indurated rocks, can potentially bias estimates of species richness, evenness, and body size distribution derived from fossil assemblages. Fossil collections made from well-indurated rocks consistently exhibit lower species richness, lower evenness, and larger average specimen size relative to collections made from unconsolidated sediments, even when collections are drawn from the same assemblage. This phenomenon is known as lithification bias. While the bias itself has been demonstrated empirically, much less attention has been paid to its causes. Proposed causes include taphonomic processes (e.g., destruction of small specimens during early diagenesis) and methodological differences (e.g., sieving vs. counting specimens on outcrops, bedding surfaces, or mechanically split surfaces). Here we investigate the potential effects of preferential intersection that could also result in a methodologically related bias: the preferential sampling of larger specimens relative to smaller ones when fossils are counted on rock surfaces. We used an analogue model to simulate preferential intersection (fossil collection via splitting fossiliferous rocks) and compare the results with a random-draw model that approximates the effects of sieving. The model was parameterized using nine different combinations of species abundance and species size distributions. The results show that, with rare exceptions, species richness is 5-23% lower, evenness 5-25% lower, and average specimen size 24-150% larger in preferential-intersection than in random-draw simulations. We conclude that preferential intersection can impose a significant bias independent of other mechanisms (e.g., preferential destruction of smaller specimens during diagenetic or sampling processes), that the magnitude of this bias is partially dependent on the species abundance and size distributions, and that this bias alone does not fully account for empirically observed lithification bias on species richness (i.e., other sources of bias are also at work).

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.4
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Biology

Semicassis globosum (Mollusca: Gastropoda: Cassidae) from the upper Eocene Ocala Limestone of Florida with redescription and discussion of its extreme morphological variability

Shamindri Tennakoon, Roger W. Portell, Elizabeth Petsios, Carrie L. Tyler, Michal Kowalewski

Summary: This study aims to resolve the taxonomy of cassid gastropods from the upper Eocene Ocala Limestone. The study concludes that the specimens belong to a single species with extreme morphological variability, and highlights the challenges associated with delineating species status using low numbers of specimens.

HISTORICAL BIOLOGY (2023)

Article Multidisciplinary Sciences

Phylotranscriptomic insights into a Mesoproterozoic-Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Zheng Hou, Xiaoya Ma, Xuan Shi, Xi Li, Lingxiao Yang, Shuhai Xiao, Olivier De Clerck, Frederik Leliaert, Bojian Zhong

Summary: The Ulvophyceae, a diverse group of green algae, originated earlier than expected and may have influenced biogeochemical cycles at the Mesoproterozoic-Neoproterozoic transition, according to a study reconstructing their phylogeny using extensive nuclear gene data.

NATURE COMMUNICATIONS (2022)

Article Multidisciplinary Sciences

Preservation of early Tonian macroalgal fossils from the Dolores Creek Formation, Yukon

Katie M. Maloney, James D. Schiffbauer, Galen P. Halverson, Shuhai Xiao, Marc Laflamme

Summary: The rise of eukaryotic macroalgae played a crucial role in Earth's history, leading to ecosystems habitable to animals. However, the diversification and expansion of macroalgae are limited by a biased fossil record. Non-mineralizing organisms are rarely preserved and occur only in exceptional environments conducive to fossilization.

SCIENTIFIC REPORTS (2022)

Article Multidisciplinary Sciences

Saccorhytus is an early ecdysozoan and not the earliest deuterostome

Yunhuan Liu, Emily Carlisle, Huaqiao Zhang, Ben Yang, Michael Steiner, Tiequan Shao, Baichuan Duan, Federica Marone, Shuhai Xiao, Philip C. J. Donoghue

Summary: The early history of deuterostomes, composed of chordates, echinoderms, and hemichordates, is still controversial due to a lack of representative fossils. The microscopic animal Saccorhytus coronarius was previously thought to be an early deuterostome, but new material and analyses have shown that it actually belongs to the total group Ecdysozoa. This expands the morphological and ecological diversity of early Cambrian ecdysozoans.

NATURE (2022)

Article Geosciences, Multidisciplinary

Enigmatic provenance of carbonate clasts in Cryogenian glacial diamictite of the Nantuo Formation in South China

Morrison Nolan, Shuhai Xiao, Benjamin Gill, Rachel Reid, Maxwel Schwid

Summary: This study reveals the source of carbonate clasts in the Nantuo Formation of the Yangtze Craton in South China, ruling out the possibility of the Shennongjia Group being the exclusive source. The findings suggest that the clasts may originate from pre-Marinoan carbonate successions in South China or from another adjacent craton during the Cryogenian Period.

PRECAMBRIAN RESEARCH (2022)

Article Geosciences, Multidisciplinary

Integrated study of the Doushantuo Formation in northwestern Hunan Province: Implications for Ediacaran chemostratigraphy and biostratigraphy in South China

Hongyi Shi, Qing Ouyang, Chuanming Zhou, Shuhai Xiao, Zhe Chen, Chengguo Guan

Summary: The Ediacaran Doushantuo Formation in South China provides important records of biological and environmental changes after the global glaciations in the Neoproterozoic period. This study presents new litho-, chemo-, and biostratigraphic data from the shelf-margin facies of the Doushantuo Formation, confirming the correlation of the upper Doushantuo Formation between shelf-margin and shelf-lagoon facies. The discovery of acritarch assemblages also highlights their potential as an independent stratigraphic tool in the subdivision and correlation of Ediacaran strata.

PRECAMBRIAN RESEARCH (2022)

Article Geosciences, Multidisciplinary

An authigenic response to Ediacaran surface oxidation: Remarkable micron-scale isotopic heterogeneity revealed by SIMS

Huan Cui, Kouki Kitajima, Ian J. Orland, Jean-Marc Baele, Shuhai Xiao, Alan J. Kaufman, Adam Denny, Michael J. Spicuzza, John H. Fournelle, John W. Valley

Summary: Through studying an outer-shelf section in southern China, we discovered the heterogeneous nature of the Ediacaran Shuram excursion (SE) and proposed that methane oxidation played a crucial role in modulating this anomaly.

PRECAMBRIAN RESEARCH (2022)

Article Multidisciplinary Sciences

Spatial distribution, diversity, and taphonomy of clypeasteroid and spatangoid echinoids of the central Florida Keys

Tobias B. Grun, Michal Kowalewski

Summary: This study summarizes SCUBA surveys of clypeasteroid and spatangoid echinoids conducted in the central part of the Florida Keys, documenting the widespread distribution of echinoids across various habitats and providing insights into the present-day status of local echinoid populations for assessing future regional changes in echinoid distribution and abundance.
Article Multidisciplinary Sciences

The origin and early evolution of complex organisms

Xunlai Yuan, Ke Pang, Qing Tang, Guangjin Li, Shuhai Xiao, Chuanming Zhou, Zhe Chen, Lei Chen, Bin Wan, Wei Wang, Chengguo Guan, Qing Ouyang, Changtai Niu, Xiaopeng Wang, Yarong Liu

Summary: Complex multicellular eukaryotic organisms have dominated the Earth since the Precambrian-Cambrian transition, but the timing and dynamics of the evolutionary transitions from unicellular ancestors to complex organisms remain largely unclear. Recent advances in paleontology and molecular clock analysis suggest that complex organisms have deep roots in the "Boring Billion" period. This period, characterized by apparent environmental quiescence and evolutionary stasis, may have provided the conditions for the divergence of single-celled ancestors into major groups of complex organisms.

CHINESE SCIENCE BULLETIN-CHINESE (2023)

Article Paleontology

Systematic paleontology of macroalgal fossils from the Tonian Mackenzie Mountains Supergroup

Katie M. Maloney, Dakota P. Maverick, James D. Schiffbauer, Galen P. Halverson, Shuhai Xiao, Marc Laflamme

Summary: The preservation of Proterozoic eukaryotic macroalgae is challenging due to the lack of necessary morphological details. Two additional forms have unidentified affinities, but the presence of three unique algal forms supports previous reports of increased algal diversity in the early Neoproterozoic.

JOURNAL OF PALEONTOLOGY (2023)

Article Geology

ONSHORE-OFFSHORE TRENDS IN THE TEMPORAL RESOLUTION OF MOLLUSCAN DEATH ASSEMBLAGES: HOW AGE-FREQUENCY DISTRIBUTIONS REVEAL QUATERNARY SEA-LEVEL HISTORY

Matias Do Nascimento Ritter, Fernando Erthal, Matthew A. Kosnik, Michal Kowalewski, Joao Carlos Coimbra, Felipe Caron, Darrell S. Kaufman

Summary: Surficial shell accumulations from shallow marine settings are typically dominated by recent specimens and exhibit strongly right-skewed age-frequency distributions. This study examines age-frequency distributions from offshore settings in southern Brazil and finds that deeper water environments have slightly longer time averaging and symmetrical to left-skewed distributions dominated by specimens from the Last Glacial Maximum. The observed changes in age-frequency distributions along the onshore-offshore gradient likely reflect sea-level changes and corresponding variations in biological productivity.

PALAIOS (2023)

Article Multidisciplinary Sciences

Nitrate limitation in early Neoproterozoic oceans delayed the ecological rise of eukaryotes

Junyao Kang, Benjamin Gill, Rachel Reid, Feifei Zhang, Shuhai Xiao

Summary: The early Neoproterozoic Era (approximately 1000 to 800 million years ago) saw the emergence of eukaryotes. This study examines whether nitrate availability influenced this evolution by analyzing nitrogen isotope compositions (δ15N) of marine carbonates from the early Tonian (approximately 1000 to 800 million years ago) Huaibei Group in North China. The findings suggest that nitrate limitation existed in the early Neoproterozoic oceans and that an increase in nitrate availability around 800 million years ago may have contributed to the ecological rise of eukaryotes.

SCIENCE ADVANCES (2023)

Article Biology

Tonian carbonaceous compressions indicate that Horodyskia is one of the oldest multicellular and coenocytic macro-organisms

Guangjin Li, Lei Chen, Ke Pang, Qing Tang, Chengxi Wu, Xunlai Yuan, Chuanming Zhou, Shuhai Xiao

Summary: Horodyskia, a rare macrofossil, has been found to have organic walls and is interpreted as a colonial organism composed of multinucleated (coenocytic) cells. This study provides evidence that eukaryotes acquired macroscopic size through coenocytism and colonial multicellularity at least 1.48 billion years ago.

COMMUNICATIONS BIOLOGY (2023)

Article Biology

Musculature of an Early Cambrian cycloneuralian animal

Huaqiao Zhang, Shuhai Xiao, Mats E. Eriksson, Baichuan Duan, Andreas Maas

Summary: This study reports the exceptional preservation of cycloneuralian introvert musculature in Fortunian rocks of South China, indicating a possible affinity with scalidophorans or priapulans and evolution during the early Cambrian Period.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2023)

Article Multidisciplinary Sciences

Recurrent photic zone euxinia limited ocean oxygenation and animal evolution during the Ediacaran

Wang Zheng, Anwen Zhou, Swapan K. Sahoo, Morrison R. Nolan, Chadlin M. Ostrander, Ruoyu Sun, Ariel D. Anbar, Shuhai Xiao, Jiubin Chen

Summary: We used mercury isotope compositions from black shale sections in South China to reconstruct the redox conditions of the Ediacaran ocean. Our results provide compelling evidence for recurrent photic zone euxinia occurring on the continental margin of South China during times of ocean oxygenation events. We suggest that this euxinia was driven by increased availability of sulfate and nutrients from a transiently oxygenated ocean, but also may have inhibited oxygen production and restricted the expansion of macroscopic oxygen-demanding animals in the Ediacaran.

NATURE COMMUNICATIONS (2023)

暂无数据