Cis-regulated additively expressed genes play a fundamental role in the formation of triploid loquat (Eriobotrya japonica (Thunb.) Lindl.) Heterosis

Transcriptome analysis of neo-tetraploid rice reveals specific differential gene expressions associated with fertility and heterosis

(2017) Haibin Guo et al.   Scientific Reports

Transcriptome profiling and comparison of maize ear heterosis during the spikelet and floret differentiation stages

(2016) Xiaojiao Hu et al.   BMC GENOMICS

Transcriptome analysis of Chlorella zofingiensis to identify genes and their expressions involved in astaxanthin and triacylglycerol biosynthesis

(2016) Weiping Huang et al.   Algal Research-Biomass Biofuels and Bioproducts

Autotetraploid rice methylome analysis reveals methylation variation of transposable elements and their effects on gene expression

(2015) Jie Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Heterosis and differential gene expression in hybrids and parents in Bombyx mori by digital gene expression profiling

(2015) Hua Wang et al.   Scientific Reports

Genome-wide meta-analysis of maize heterosis reveals the potential role of additive gene expression at pericentromeric loci

(2014) Alexander Thiemann et al.   BMC PLANT BIOLOGY

Extensivecis-Regulatory Variation Robust to Environmental Perturbation inArabidopsis

(2014) Francisco A. Cubillos et al.   PLANT CELL

Genetic Diversity of Loquat [Eriobotrya japonica (Thunb.) Lindl.] Native to Guizhou Province (China) and Its Potential in the Genetic Improvement of Domesticated Cultivars

(2014) Di Wu et al.   PLANT MOLECULAR BIOLOGY REPORTER

Transcriptome analysis of rice root heterosis by RNA-Seq

(2013) Rongrong Zhai et al.   BMC GENOMICS

RNA-Seq Analysis of Allele-Specific Expression, Hybrid Effects, and Regulatory Divergence in Hybrids Compared with Their Parents from Natural Populations

(2013) Graeme D.M. Bell et al.   Genome Biology and Evolution

Genomic and epigenetic insights into the molecular bases of heterosis

(2013) Z. Jeffrey Chen   NATURE REVIEWS GENETICS

Identification of Transcriptome SNPs for Assessing Allele-Specific Gene Expression in a Super-Hybrid Rice Xieyou9308

(2013) Rongrong Zhai et al.   PLoS One

A non-additive interaction in a single locus causes a very short root phenotype in wheat

(2013) Wanlong Li et al.   THEORETICAL AND APPLIED GENETICS

Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents

(2012) A. Paschold et al.   GENOME RESEARCH

Polyploidy and its effect on evolutionary success: old questions revisited with new tools

(2012) A Madlung   HEREDITY

Homoeolog expression bias and expression level dominance in allopolyploid cotton

(2012) M-J Yoo et al.   HEREDITY

Transcriptome analysis of rice mature root tissue and root tips in early development by massive parallel sequencing

(2012) T. Kyndt et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Global View of Hybrid Vigor: DNA Methylation, Small RNAs, and Gene Expression

(2012) N. R. Hofmann   PLANT CELL

Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids

(2012) Rhonda C. Meyer et al.   PLANT JOURNAL

Heterosis of Arabidopsis hybrids between C24 and Col is associated with increased photosynthesis capacity

(2012) R. Fujimoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids

(2012) Xiaoli Shi et al.   Nature Communications

Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

(2011) Patricia J. Wittkopp et al.   NATURE REVIEWS GENETICS

Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor

(2011) M. Groszmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulatory divergence in Drosophila revealed by mRNA-seq

(2010) C. J. McManus et al.   GENOME RESEARCH

Epigenetics and gene expression

(2010) E R Gibney et al.   HEREDITY

Comparative Transcriptional Profiling and Preliminary Study on Heterosis Mechanism of Super-Hybrid Rice

(2010) Gui-Sheng Song et al.   Molecular Plant

Molecular mechanisms of polyploidy and hybrid vigor

(2010) Z. Jeffrey Chen   TRENDS IN PLANT SCIENCE

Genomic and expression plasticity of polyploidy

(2009) Scott Jackson et al.   CURRENT OPINION IN PLANT BIOLOGY

Global Analysis of Allele-Specific Expression in Arabidopsis thaliana

(2009) Xu Zhang et al.   GENETICS

A transcriptomic analysis of superhybrid rice LYP9 and its parents

(2009) G. Wei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation

(2009) I. Tirosh et al.   SCIENCE

Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines

(2008) Xiaomeng Ge et al.   BMC PLANT BIOLOGY

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis

(2008) Robert M Stupar et al.   BMC PLANT BIOLOGY

A Genome-Wide Transcription Analysis Reveals a Close Correlation of Promoter INDEL Polymorphism and Heterotic Gene Expression in Rice Hybrids

(2008) Hui-Yong Zhang et al.   Molecular Plant

Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids

(2008) Zhongfu Ni et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Dominance and the evolutionary accumulation of cis- and trans-effects on gene expression

(2008) B. Lemos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA