标题
The search for loci under selection: trends, biases and progress
作者
关键词
-
出版物
MOLECULAR ECOLOGY
Volume 27, Issue 6, Pages 1342-1356
出版商
Wiley
发表日期
2018-03-10
DOI
10.1111/mec.14549
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Sex matters in massive parallel sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems
- (2017) Laura Benestan et al. MOLECULAR ECOLOGY
- Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations
- (2017) Julian M. Catchen et al. Molecular Ecology Resources
- What can genome-wide association studies tell us about the evolutionary forces maintaining genetic variation for quantitative traits?
- (2017) Emily B. Josephs et al. NEW PHYTOLOGIST
- Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions
- (2016) Sean Hoban et al. AMERICAN NATURALIST
- Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci
- (2016) R K Waples et al. HEREDITY
- Genomic Profiles of Diversification and Genotype–Phenotype Association in Island Nematode Lineages
- (2016) Angela McGaughran et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome scan reveals selection acting on genes linked to stress response in wild pearl millet
- (2016) Cécile Berthouly-Salazar et al. MOLECULAR ECOLOGY
- Genomics of local adaptation with gene flow
- (2016) Anna Tigano et al. MOLECULAR ECOLOGY
- Comparing RADseq and microsatellites to infer complex phylogeographic patterns, an empirical perspective in the Crucian carp,Carassius carassius,L.
- (2016) Daniel L. Jeffries et al. MOLECULAR ECOLOGY
- Genomic and phenotypic differentiation of Arabidopsis thaliana along altitudinal gradients in the North Italian Alps
- (2016) Torsten Günther et al. MOLECULAR ECOLOGY
- Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation
- (2016) David B. Lowry et al. Molecular Ecology Resources
- Convergent local adaptation to climate in distantly related conifers
- (2016) S. Yeaman et al. SCIENCE
- Patterns of neutral and adaptive genetic diversity across the natural range of sugar pine (Pinus lambertiana Dougl.)
- (2016) Carl Vangestel et al. Tree Genetics & Genomes
- Single-Locus versus Multilocus Patterns of Local Adaptation to Climate in Eastern White Pine (Pinus strobus, Pinaceae)
- (2016) Om P. Rajora et al. PLoS One
- Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of FST
- (2015) Michael C. Whitlock et al. AMERICAN NATURALIST
- Detecting adaptive evolution based on association with ecological gradients: Orientation matters!
- (2015) E Frichot et al. HEREDITY
- Isolation by environment in White-breasted Nuthatches (Sitta carolinensis) of the Madrean Archipelago sky islands: a landscape genomics approach
- (2015) Joseph D. Manthey et al. MOLECULAR ECOLOGY
- Correlation between shell phenotype and local environment suggests a role for natural selection in the evolution ofPlacostylussnails
- (2015) E. J. Dowle et al. MOLECULAR ECOLOGY
- A practical guide to environmental association analysis in landscape genomics
- (2015) Christian Rellstab et al. MOLECULAR ECOLOGY
- Genomic resources and their influence on the detection of the signal of positive selection in genome scans
- (2015) S. Manel et al. MOLECULAR ECOLOGY
- The relative power of genome scans to detect local adaptation depends on sampling design and statistical method
- (2015) Katie E. Lotterhos et al. MOLECULAR ECOLOGY
- Genomic variation across landscapes: insights and applications
- (2015) Jason G. Bragg et al. NEW PHYTOLOGIST
- Towards the identification of the loci of adaptive evolution
- (2015) Carolina Pardo-Diaz et al. Methods in Ecology and Evolution
- Phylogenomic analyses reveal latitudinal population structure and polymorphisms in heat stress genes in the North Atlantic snailNucella lapillus
- (2014) Nathaniel D. Chu et al. MOLECULAR ECOLOGY
- Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests
- (2014) Katie E. Lotterhos et al. MOLECULAR ECOLOGY
- Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
- (2014) Tami E. Cruickshank et al. MOLECULAR ECOLOGY
- Environmental Variables Explain Genetic Structure in a Beetle-Associated Nematode
- (2014) Angela McGaughran et al. PLoS One
- Robust Identification of Local Adaptation from Allele Frequencies
- (2013) T. Gunther et al. GENETICS
- Optimizing the trade-off between spatial and genetic sampling efforts in patchy populations: towards a better assessment of functional connectivity using an individual-based sampling scheme
- (2013) J. G. Prunier et al. MOLECULAR ECOLOGY
- Signatures of selection in the Iberian honey bee (Apis mellifera iberiensis) revealed by a genome scan analysis of single nucleotide polymorphisms
- (2013) Julio Chávez-Galarza et al. MOLECULAR ECOLOGY
- Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations
- (2013) Stéphane De Mita et al. MOLECULAR ECOLOGY
- Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate
- (2013) V. L. Sork et al. Tree Genetics & Genomes
- A high-performance computing toolset for relatedness and principal component analysis of SNP data
- (2012) X. Zheng et al. BIOINFORMATICS
- The Relationship Between FST and the Frequency of the Most Frequent Allele
- (2012) M. Jakobsson et al. GENETICS
- A Critical Assessment of Storytelling: Gene Ontology Categories and the Importance of Validating Genomic Scans
- (2012) Pavlos Pavlidis et al. MOLECULAR BIOLOGY AND EVOLUTION
- Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)
- (2012) MORTEN T. LIMBORG et al. MOLECULAR ECOLOGY
- The genomic basis of adaptive evolution in threespine sticklebacks
- (2012) Felicity C. Jones et al. NATURE
- Differential confounding of rare and common variants in spatially structured populations
- (2012) Iain Mathieson et al. NATURE GENETICS
- Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
- (2012) Brant K. Peterson et al. PLoS One
- Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers
- (2012) Eva-Maria Willing et al. PLoS One
- A general and simple method for obtainingR2from generalized linear mixed-effects models
- (2012) Shinichi Nakagawa et al. Methods in Ecology and Evolution
- Joint analysis of demography and selection in population genetics: where do we stand and where could we go?
- (2011) JUNRUI LI et al. MOLECULAR ECOLOGY
- Comparison ofFSToutlier tests for SNP loci under selection
- (2011) SHAWN R. NARUM et al. Molecular Ecology Resources
- Effects of sample size, number of markers, and allelic richness on the detection of spatial genetic pattern
- (2011) ERIN L. LANDGUTH et al. Molecular Ecology Resources
- A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
- (2011) Robert J. Elshire et al. PLoS One
- A Map of Local Adaptation in Arabidopsis thaliana
- (2011) A. Fournier-Level et al. SCIENCE
- The Next Generation of Molecular Markers From Massively Parallel Sequencing of Pooled DNA Samples
- (2010) Andreas Futschik et al. GENETICS
- Using Environmental Correlations to Identify Loci Underlying Local Adaptation
- (2010) G. Coop et al. GENETICS
- Spurious correlations and inference in landscape genetics
- (2010) SAMUEL A. CUSHMAN et al. MOLECULAR ECOLOGY
- Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field
- (2010) STÉPHANIE MANEL et al. MOLECULAR ECOLOGY
- Landscape genetics: where are we now?
- (2010) ANDREW STORFER et al. MOLECULAR ECOLOGY
- LEARNING ABOUT MODES OF SPECIATION BY COMPUTATIONAL APPROACHES
- (2009) Céline Becquet et al. EVOLUTION
- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species
- (2009) M A F Noor et al. HEREDITY
- Detecting loci under selection in a hierarchically structured population
- (2009) L Excoffier et al. HEREDITY
- How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study
- (2009) J. L. Strasburg et al. MOLECULAR BIOLOGY AND EVOLUTION
- Shifting Paradigm of Association Studies: Value of Rare Single-Nucleotide Polymorphisms
- (2008) Ivan P. Gorlov et al. AMERICAN JOURNAL OF HUMAN GENETICS
- LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method
- (2008) Tiago Antao et al. BMC BIOINFORMATICS
- A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
- (2008) M. Foll et al. GENETICS
- Linkage disequilibrium — understanding the evolutionary past and mapping the medical future
- (2008) Montgomery Slatkin NATURE REVIEWS GENETICS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started