Life-stage-associated remodelling of lipid metabolism regulation in Atlantic salmon

Regulatory divergence of homeologous Atlantic salmon elovl5 genes following the salmonid-specific whole-genome duplication

(2016) Greta Carmona-Antoñanzas et al.   GENE

Multi-tissue transcriptome profiles for coho salmon ( Oncorhynchus kisutch ), a species undergoing rediploidization following whole-genome duplication

(2016) Jin-Hyoung Kim et al.   Marine Genomics

The Atlantic salmon genome provides insights into rediploidization

(2016) Sigbjørn Lien et al.   NATURE

Functional Divergence of Type 2 Deiodinase Paralogs in the Atlantic Salmon

(2015) Marlene Lorgen et al.   CURRENT BIOLOGY

Wide-targeted gene expression infers tissue-specific molecular signatures of lipid metabolism in fed and fasted fish

(2015) Simona Rimoldi et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Dietary cholesterol supplementation to a plant-based diet suppresses the complete pathway of cholesterol synthesis and induces bile acid production in Atlantic salmon (Salmo salar L.)

(2014) Trond M. Kortner et al.   BRITISH JOURNAL OF NUTRITION

A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification

(2014) D. J. Macqueen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

Conservation of lipid metabolic gene transcriptional regulatory networks in fish and mammals

(2013) Greta Carmona-Antoñanzas et al.   GENE

Nutritional analysis of freshwater and marine amphipods from the Strait of Gibraltar and potential aquaculture applications

(2013) Elena Baeza-Rojano et al.   JOURNAL OF SEA RESEARCH

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Lipid components of flax, perilla, and chia seeds

(2012) Ozan Nazim Ciftci et al.   EUROPEAN JOURNAL OF LIPID SCIENCE AND TECHNOLOGY

In vivo and in vitro insulin and fasting control of the transmembrane fatty acid transport proteins in Atlantic salmon (Salmo salar)

(2011) Joan Sánchez-Gurmaches et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Genotype-specific responses in Atlantic salmon (Salmo salar) subject to dietary fish oil replacement by vegetable oil: a liver transcriptomic analysis

(2011) Sofia Morais et al.   BMC GENOMICS

Effects of Altered Maternal Folic Acid, Vitamin B12 and Docosahexaenoic Acid on Placental Global DNA Methylation Patterns in Wistar Rats

(2011) Asmita Kulkarni et al.   PLoS One

Membrane Fatty Acid Transporters as Regulators of Lipid Metabolism: Implications for Metabolic Disease

(2010) Jan F. C. Glatz et al.   PHYSIOLOGICAL REVIEWS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The combined impact of plant-derived dietary ingredients and acute stress on the intestinal arachidonic acid cascade in Atlantic salmon ( Salmo salar)

(2009) Anthony Oxley et al.   BRITISH JOURNAL OF NUTRITION

FISH LARVAL PHYSIOLOGY. - Edited by R. N. Finn and B. G. Kapoor

(2009) ANDY D. NUNN   JOURNAL OF FISH BIOLOGY

Functional genomics reveals increases in cholesterol biosynthetic genes and highly unsaturated fatty acid biosynthesis after dietary substitution of fish oil with vegetable oils in Atlantic salmon (Salmo salar)

(2008) Michael J Leaver et al.   BMC GENOMICS

Towards Fish Lipid Nutrigenomics: Current State and Prospects for Fin-Fish Aquaculture

(2008) Michael J. Leaver et al.   REVIEWS IN FISHERIES SCIENCE